[Biojava-dev] Oracle Database?

Vaibhav Agrawal va09 at uow.edu.au
Sun May 11 21:46:55 EDT 2003


Hi!
Does bioJava support Oracle, and if yes which version, and do i have
have to download some jars.
As when i try to run UploadFlat.java file, i get this exception.

$ java biosql/UploadFlat jdbc:oracle:thin:@wraith:1521:csci vaibhav
vaibhav tempGeno Genbank tempGenome.txt
Opening database: tempGeno
java.sql.SQLException: No suitable driver
        at java.sql.DriverManager.getConnection(DriverManager.java:532)
        at java.sql.DriverManager.getConnection(DriverManager.java:171)
        at
org.biojava.utils.JDBCConnectionPool.takeConnection(JDBCConnectionPool.java:88)
        at
org.biojava.bio.seq.db.biosql.BioSQLSequenceDB.isBioentryPropertySupported(BioSQLSequenceDB.java:981)
rethrown as org.biojava.bio.BioRuntimeException
        at
org.biojava.bio.seq.db.biosql.BioSQLSequenceDB.isBioentryPropertySupported(BioSQLSequenceDB.java:992)
        at
org.biojava.bio.seq.db.biosql.BioSQLSequenceDB.<init>(BioSQLSequenceDB.java:99)
        at biosql.UploadFlat.main(UploadFlat.java:30)
$

Thank you.

Regards,
Vaibhav.




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