[Biojava-dev] Multi Line Comments

[Schreiber, Mark]

Hi -

It's actually perfectly valid GenBank to have only one Comment entry.
Having said that I find this to be a problem with VectorNTI also so when
I next have five minutes I will look into making a IO customization to
support this problem.

- Mark


> -----Original Message-----
> From: kevin.echols at syngenta.com [mailto:kevin.echols at syngenta.com] 
> Sent: Thursday, 23 January 2003 11:30 a.m.
> To: biojava-dev at biojava.org
> Subject: [Biojava-dev] Multi Line Comments
> 
> 
> All
> 
> Is it possible to get biojava to generate single comment lines?
> 
> Currently Vector NTI does not handle mult-line comments. For 
> example using the Biojava API 
> "SeqIOTools.writeGenbank(OutputStream, Sequence)" The Genbank 
> file is written as follows:
> 
> ===================================================
> LOCUS       444444                55555 bp   DNA     circular
> 17-OCT-2002
> SOURCE      
>   ORGANISM  
> COMMENT     werwerwerwerwe
>     werwerwerwer
>     werwerwerewrere
>     ewrwerwrwerew
>     werwerwerwer
>     errewrwrew
>     ewrrwerewrwer ====================================================
> 
> However Vector NTI expects it to look like this:
> 
> 
> 
> ====================================================
> 
> 
> LOCUS       444444                55555 bp   DNA     circular
> 17-OCT-2002
> SOURCE      
>   ORGANISM  
> COMMENT     werwerwerwerwe
> COMMENT     werwerwerwer
> COMMENT     werwerwerewrere
> COMMENT     ewrwerwrwerew
> COMMENT     werwerwerwer
> COMMENT     errewrwrew
> COMMENT     ewrrwerewrwer
> ====================================================
> 
> _______________________________________________
> biojava-dev mailing list
> biojava-dev at biojava.org 
> http://biojava.org/mailman/listinfo/biojava-dev
> 
=======================================================================
Attention: The information contained in this message and/or attachments
from AgResearch Limited is intended only for the persons or entities
to which it is addressed and may contain confidential and/or privileged
material. Any review, retransmission, dissemination or other use of, or
taking of any action in reliance upon, this information by persons or
entities other than the intended recipients is prohibited by AgResearch
Limited. If you have received this message in error, please notify the
sender immediately.
=======================================================================