[MOBY-l] combining SADI services with BioMoby services in a Taverna workflow

[Mark Wilkinson]

To go into Moby services, you have to put "moby object" widgets into the  
workflow and then fill them with the output from the SADI service (the  
SADI widgets are "smart" and will automatically unpack themselves  
correctly).

To go from Moby into SADI, you will have to add a parser for whatever  
output object you have (comes from a right-click on the output node in the  
"examine service" context menu).  The parser will unpack the Moby object  
into raw text, which can be fed to whatever slot you need on the SADI  
widget.

Hope that helps!

M




On Thu, 29 Jul 2010 10:58:07 -0700, Alexandre Riazanov  
<alexandre.riazanov at gmail.com> wrote:

> Hi,
>
> Apologies if you receive this twice.
>
> Does anybody have experience with combining SADI services with BioMoby
> services in a Taverna workflow without coding?
>
> Is this possible at all? I would be grateful for any workflow examples
> and/or pointers to docs/wikis/mailing lists.
>
> ======================================
> Alexandre Riazanov (Alexander Ryazanov), PhD
> Saint John, New Brunswick, Canada
> Skype: alexandre.riazanov
> http://www.freewebs.com/riazanov/
> http://www.linkedin.com/in/riazanov
> ======================================
> _______________________________________________
> moby-l mailing list
> moby-l at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/moby-l


-- 
--
Dr. Mark Wilkinson
Assistant Professor, Medical Genetics
PI Bioinformatics, Heart + Lung Institute
St. Paul's Hospital/UBC
Vancouver, BC, Canada