[MOBY-l] Java CentralImpl call problem

[Carol Lushbough]

All,

I was wondering if someone could help me with this problem  I'm trying 
to execute a BioMoby service using XML in a java applicaiton

When I try to execute the following code:

                String response = new 
CentralImpl("http://mobycentral.icapture.ubc.ca/cgi-bin/MOBY05/mobycentral.pl", 
"http://biomoby.org/").call(mr.getService().getName(),inputXMLString);

I receive the following error message:

http://mobycentral.icapture.ubc.ca/cgi-bin/MOBY05/mobycentral.plnull
org.biomoby.shared.MobyException: 
http://mobycentral.icapture.ubc.ca/cgi-bin/MOBY05/mobycentral.plnull
        at org.biomoby.client.CentralImpl.doCall(CentralImpl.java:221)
        at org.biomoby.client.CentralImpl.call(CentralImpl.java:1506)

Caused by: Denied access to method (ClustalWFastaCollection) in class 
(main) at /usr/lib/perl5/site_perl/5.8.5/SOAP/Lite.pm line 2509, <IN> 
line 131440.

I"m pretty sure my inputXMLString is OK because when I use it in 
dashboard, it works fine.

I also tried creating a MobyContentInstance object and calling 
MobyRequest setInput but the ">" in my FASTA records doesn't get 
formated correctly.

Thanks!

Carol



               

-- 
Carol Lushbough
Assistant Professor of Computer Science
University of South Dakota
Vermillion, SD 57069
(605) 677-6138