[moby] [MOBY-l] Re: sth_collection_ins

Mark Wilkinson markw at illuminae.com
Tue Sep 6 16:04:10 UTC 2005


It is not implemented, and may not be for a very long time (if ever)
because it turns out that XML Schema has limitations that prevent us
from accurately describing MOBY Objects.  As such, we may never be able
to *precisely* describe a MOBY service interface from a WSDL document.

This is an XSD limitation, not a MOBY limitation :-/

M



On Tue, 2005-09-06 at 12:24 +0200, scaglione wrote:
> hello,
> I have finished (hopefully) to install moby central in my machine. I'm working 
> to add some new GOWlab webservices into my moby central (up to now only "MOBY 
> object" and "www.illuminae.com" services are available), to use these 
> webservices into Taverna. 
> Any suggestions?
> The registerService WSDL ( http://cvs.bioperl.org/cgi-
> bin/viewcvs/viewcvs.cgi/moby-live/Perl/MOBY/Central.html?
> cvsroot=biomoby&rev=1.5#registerservicewsdl ) seems to be useful for me, but 
> unfortunately not implemented yet... 
> Isn't it or I'm missing anything?
> thanks
> silvia 
> 
> Scrive scaglione <silvia77 at dist.unige.it>:
> 
> > hello,
> > I have followed instructions to install a moby central in my machine.I have 
> > tried the testMOBYClientCentral_v05.pl script on my mobycentral and an error
> > 
> > appeared:  
> > 
> > >perl testMOBYCentral_v05.pl 
> > 
> > Useless use of hash element in void context 
> > at /usr/lib/perl5/site_perl/5.8.5/RDF/Core/Serializer.pm line 52.
> > Global symbol "$sth_collection_ins" requires explicit package name 
> > at /usr/lib/perl5/site_perl/5.8.5/MOBY/Central.pm line 3426.
> > Compilation failed in require at testMOBYCentral_v05.pl line 4.
> > BEGIN failed--compilation aborted at testMOBYCentral_v05.pl line 4.
> > 
> > what does it mean?
> > The overall configuration of the moby central seemed to be ok, since the test
> > 
> > of the same script on the main mobycentral works...
> > many thanks
> > silvia
> > 
> > 
> > 
> > -- 
> > PhD. Silvia Scaglione
> > DIST University of Genoa
> > Viale Causa,13
> > 16145 Genoa
> > phone +39 010 353 2789
> > phone CBA +39 010 5737 505
> > fax +39 010 353 2948
> 
> 
-- 
"Ontologists do it with the edges!"

Mark Wilkinson
Asst. Professor
Dept. of Medical Genetics
University of British Columbia
PI in Bioinformatics
iCAPTURE Centre
St. Paul's Hospital
Rm. 166, 1081 Burrard St.
Vancouver, BC, V6Z 1Y6
tel: 604 682 2344 x62129
fax: 604 806 9274




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