[moby] [MOBY-l] Connecting to BIOMOBY Central using Taverna 1.2

[Mark Wilkinson]

The URL works for me... HOWEVER it is retrieving over port 8090 from a
Tomcat applet instead of from the Perl script that (as you point out) is
now deprecated.  As such, if your firewall is preventing access on 8090
this will be the source of the problem.

I am trying to set up ProxyPass in Apache such that we can serve this
same information over port 80.  I'll let you know if we succeed.
Otherwise, you will need to open port 8090 in the interim.

>>sigh<<  Thousands of things to do, and only two hands :-/

M



On Tue, 2005-07-19 at 17:00 +0200, Ulrich Harttig wrote:
> Hello all
> 
> There seems to be a problem connecting to the standard BioMOBY
> repository at http://mobycentral.icapture.ubc.ca/
> using Taverna version 1.2.  In contrast to version 1.1 that connects w/o
> problem, the new 'add Biomoby scavenger' dialog asks now for an URL for
> a BioMOBY Object RDF document with the default pointing to
> "http://biomoby.org/RESOURCES/MOBY-S/Objects".
> But this seems to be no longer a valid URL (and the RESOURCES script has
> also disappeared from the BioMOBY CVS repository)
> Does anyone know what the correct entry would be ? (leavin it empty
> doesn't work) And where one could find documentation explaining the RDF
> business that is also used for describing Moby services.
> 
> Thanks for your help
> Ulrich
> 
-- 
"Ontologists do it with the edges!"

Mark Wilkinson
Asst. Professor
Dept. of Medical Genetics
University of British Columbia
PI in Bioinformatics
iCAPTURE Centre
St. Paul's Hospital
Rm. 166, 1081 Burrard St.
Vancouver, BC, V6Z 1Y6
tel: 604 682 2344 x62129
fax: 604 806 9274