[MOBY-l] Service Hierarchy Attempt

Jason E. Stewart jason at openinformatics.com
Wed May 1 14:30:26 UTC 2002


Hey All,

Here's the start of the ServiceType Ontology. It would be nice if
someone with DAG-Edit knowledge could make this a little nicer, and
maybe we could toss up an HTML version of it on the moby site using
Amigo.

jas.
--
Service
*Computational Service
**Assembly
**Phylogenetic
**Gene Finding
***Prokaryotic
****Glimmer
***Eukaryotic
****GeneScan
****Grail
**RNA Secondary Structure
**Translation Service
**Pattern Finding
***Restriction Mapping
***Transcription Factor Binding
**Hydrophobicity
**Repeat Finding
**Repeat Masking
**Clustering
***Hierarichal
***Non-Hierarchical
****K-Means
****Self Organized Maps
**Alignment
***Pairwise
***Multiple
**Sequence Similarity
**Functional Assignment (Gene Family (e.g. Pfam) return set of GO ids)
***Smith Waterman
***Blast
****NCBI-Blast
****WU-Blast
**Primer Discovery
*Retrieval Service
*Submission Service (anything that doesn't return a MOBY object)



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