From kawas at dev.open-bio.org Wed Dec 8 11:14:14 2010 From: kawas at dev.open-bio.org (Eddie Kawas) Date: Wed, 8 Dec 2010 11:14:14 -0500 Subject: [MOBY-guts] biomoby commit Message-ID: <201012081614.oB8GEEGZ001587@dev.open-bio.org> kawas Wed Dec 8 11:14:13 EST 2010 Update of /home/repository/moby/moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data In directory dev.open-bio.org:/tmp/cvs-serv1551/lib/MOSES/MOBY/Data Modified Files: Object.pm Log Message: primitives with 'false' perl values dont get serialized properly when you call toXML() moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data Object.pm,1.4,1.5 =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data/Object.pm,v retrieving revision 1.4 retrieving revision 1.5 diff -u -r1.4 -r1.5 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data/Object.pm 2008/04/29 19:35:57 1.4 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data/Object.pm 2010/12/08 16:14:13 1.5 @@ -239,7 +239,7 @@ provision => 1, ); if ($name eq 'value' and $self->primitive) { - if ($value) { + if (defined $value) { if ($self->{cdata}) { # don't use: $self->cdata because not everybody has it $root->appendChild (XML::LibXML::CDATASection->new ($self->_express_value ($value))); } else { From kawas at dev.open-bio.org Wed Dec 8 11:16:21 2010 From: kawas at dev.open-bio.org (Eddie Kawas) Date: Wed, 8 Dec 2010 11:16:21 -0500 Subject: [MOBY-guts] biomoby commit Message-ID: <201012081616.oB8GGLFk001718@dev.open-bio.org> kawas Wed Dec 8 11:16:20 EST 2010 Update of /home/repository/moby/moby-live/Perl/MOSES-MOBY In directory dev.open-bio.org:/tmp/cvs-serv1679 Modified Files: Changes Makefile.PL Log Message: updated changes and makefile for new cpan update moby-live/Perl/MOSES-MOBY Changes,1.26,1.27 Makefile.PL,1.24,1.25 =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/Changes,v retrieving revision 1.26 retrieving revision 1.27 diff -u -r1.26 -r1.27 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/Changes 2010/01/20 14:38:20 1.26 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/Changes 2010/12/08 16:16:20 1.27 @@ -1,5 +1,9 @@ Revision history for Perl extension MOSES::MOBY. +0.96 + * Bug fix: primitives with 'false' perl values + were not serialized properly. + 0.95 * Fix to moses-testing-service.pl script. typos found in script(thanks Hong-Jie Dai). =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL,v retrieving revision 1.24 retrieving revision 1.25 diff -u -r1.24 -r1.25 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL 2010/01/20 14:37:30 1.24 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL 2010/12/08 16:16:20 1.25 @@ -6,7 +6,7 @@ # Define metadata name 'MOSES-MOBY'; - version '0.95'; + version '0.96'; license 'perl'; abstract 'This distribution aids in the creation of BioMOBY perl based web services.'; From kawas at dev.open-bio.org Thu Dec 9 09:28:30 2010 From: kawas at dev.open-bio.org (Eddie Kawas) Date: Thu, 9 Dec 2010 09:28:30 -0500 Subject: [MOBY-guts] biomoby commit Message-ID: <201012091428.oB9ESUGv014669@dev.open-bio.org> kawas Thu Dec 9 09:28:29 EST 2010 Update of /home/repository/moby/moby-live/Perl/MOSES-MOBY In directory dev.open-bio.org:/tmp/cvs-serv14630 Modified Files: MANIFEST Makefile.PL Log Message: moby-live/Perl/MOSES-MOBY MANIFEST,1.7,1.8 Makefile.PL,1.25,1.26 =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/MANIFEST,v retrieving revision 1.7 retrieving revision 1.8 diff -u -r1.7 -r1.8 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/MANIFEST 2009/03/31 21:25:49 1.7 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/MANIFEST 2010/12/09 14:28:29 1.8 @@ -19,6 +19,7 @@ inc/Module/Install/Include.pm inc/Module/Install/Makefile.pm inc/Module/Install/Metadata.pm +inc/Module/Install/Scripts.pm inc/Module/Install/Share.pm inc/Module/Install/Win32.pm inc/Module/Install/WriteAll.pm @@ -57,20 +58,20 @@ lib/MOSES/MOBY/ServiceException.pm lib/MOSES/MOBY/Tags.pm Makefile.PL -MANIFEST This list of files +MANIFEST This list of files META.yml README +share/AsyncMobyServer.cgi.template share/log4perl.properties.template share/mabuhay.file share/moby-services.cfg.template -share/AsyncMobyServer.cgi.template share/MobyServer.cgi.template share/notes +share/samples/ASYNC_SERVICE_TABLE share/samples/Service/HelloBiomobyWorld.pm share/samples/Service/Mabuhay.pm share/samples/SERVICES_TABLE -share/samples/ASYNC_SERVICE_TABLE share/USER_REGISTRIES t/MOSES-MOBY-Cache.t t/MOSES-MOBY-Registry.t -t/MOSES-MOBY.t \ No newline at end of file +t/MOSES-MOBY.t =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL,v retrieving revision 1.25 retrieving revision 1.26 diff -u -r1.25 -r1.26 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL 2010/12/08 16:16:20 1.25 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL 2010/12/09 14:28:29 1.26 @@ -6,7 +6,7 @@ # Define metadata name 'MOSES-MOBY'; - version '0.96'; + version '0.96.1'; license 'perl'; abstract 'This distribution aids in the creation of BioMOBY perl based web services.'; From kawas at dev.open-bio.org Wed Dec 8 16:14:14 2010 From: kawas at dev.open-bio.org (Eddie Kawas) Date: Wed, 8 Dec 2010 11:14:14 -0500 Subject: [MOBY-guts] biomoby commit Message-ID: <201012081614.oB8GEEGZ001587@dev.open-bio.org> kawas Wed Dec 8 11:14:13 EST 2010 Update of /home/repository/moby/moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data In directory dev.open-bio.org:/tmp/cvs-serv1551/lib/MOSES/MOBY/Data Modified Files: Object.pm Log Message: primitives with 'false' perl values dont get serialized properly when you call toXML() moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data Object.pm,1.4,1.5 =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data/Object.pm,v retrieving revision 1.4 retrieving revision 1.5 diff -u -r1.4 -r1.5 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data/Object.pm 2008/04/29 19:35:57 1.4 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/lib/MOSES/MOBY/Data/Object.pm 2010/12/08 16:14:13 1.5 @@ -239,7 +239,7 @@ provision => 1, ); if ($name eq 'value' and $self->primitive) { - if ($value) { + if (defined $value) { if ($self->{cdata}) { # don't use: $self->cdata because not everybody has it $root->appendChild (XML::LibXML::CDATASection->new ($self->_express_value ($value))); } else { From kawas at dev.open-bio.org Wed Dec 8 16:16:21 2010 From: kawas at dev.open-bio.org (Eddie Kawas) Date: Wed, 8 Dec 2010 11:16:21 -0500 Subject: [MOBY-guts] biomoby commit Message-ID: <201012081616.oB8GGLFk001718@dev.open-bio.org> kawas Wed Dec 8 11:16:20 EST 2010 Update of /home/repository/moby/moby-live/Perl/MOSES-MOBY In directory dev.open-bio.org:/tmp/cvs-serv1679 Modified Files: Changes Makefile.PL Log Message: updated changes and makefile for new cpan update moby-live/Perl/MOSES-MOBY Changes,1.26,1.27 Makefile.PL,1.24,1.25 =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/Changes,v retrieving revision 1.26 retrieving revision 1.27 diff -u -r1.26 -r1.27 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/Changes 2010/01/20 14:38:20 1.26 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/Changes 2010/12/08 16:16:20 1.27 @@ -1,5 +1,9 @@ Revision history for Perl extension MOSES::MOBY. +0.96 + * Bug fix: primitives with 'false' perl values + were not serialized properly. + 0.95 * Fix to moses-testing-service.pl script. typos found in script(thanks Hong-Jie Dai). =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL,v retrieving revision 1.24 retrieving revision 1.25 diff -u -r1.24 -r1.25 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL 2010/01/20 14:37:30 1.24 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL 2010/12/08 16:16:20 1.25 @@ -6,7 +6,7 @@ # Define metadata name 'MOSES-MOBY'; - version '0.95'; + version '0.96'; license 'perl'; abstract 'This distribution aids in the creation of BioMOBY perl based web services.'; From kawas at dev.open-bio.org Thu Dec 9 14:28:30 2010 From: kawas at dev.open-bio.org (Eddie Kawas) Date: Thu, 9 Dec 2010 09:28:30 -0500 Subject: [MOBY-guts] biomoby commit Message-ID: <201012091428.oB9ESUGv014669@dev.open-bio.org> kawas Thu Dec 9 09:28:29 EST 2010 Update of /home/repository/moby/moby-live/Perl/MOSES-MOBY In directory dev.open-bio.org:/tmp/cvs-serv14630 Modified Files: MANIFEST Makefile.PL Log Message: moby-live/Perl/MOSES-MOBY MANIFEST,1.7,1.8 Makefile.PL,1.25,1.26 =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/MANIFEST,v retrieving revision 1.7 retrieving revision 1.8 diff -u -r1.7 -r1.8 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/MANIFEST 2009/03/31 21:25:49 1.7 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/MANIFEST 2010/12/09 14:28:29 1.8 @@ -19,6 +19,7 @@ inc/Module/Install/Include.pm inc/Module/Install/Makefile.pm inc/Module/Install/Metadata.pm +inc/Module/Install/Scripts.pm inc/Module/Install/Share.pm inc/Module/Install/Win32.pm inc/Module/Install/WriteAll.pm @@ -57,20 +58,20 @@ lib/MOSES/MOBY/ServiceException.pm lib/MOSES/MOBY/Tags.pm Makefile.PL -MANIFEST This list of files +MANIFEST This list of files META.yml README +share/AsyncMobyServer.cgi.template share/log4perl.properties.template share/mabuhay.file share/moby-services.cfg.template -share/AsyncMobyServer.cgi.template share/MobyServer.cgi.template share/notes +share/samples/ASYNC_SERVICE_TABLE share/samples/Service/HelloBiomobyWorld.pm share/samples/Service/Mabuhay.pm share/samples/SERVICES_TABLE -share/samples/ASYNC_SERVICE_TABLE share/USER_REGISTRIES t/MOSES-MOBY-Cache.t t/MOSES-MOBY-Registry.t -t/MOSES-MOBY.t \ No newline at end of file +t/MOSES-MOBY.t =================================================================== RCS file: /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL,v retrieving revision 1.25 retrieving revision 1.26 diff -u -r1.25 -r1.26 --- /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL 2010/12/08 16:16:20 1.25 +++ /home/repository/moby/moby-live/Perl/MOSES-MOBY/Makefile.PL 2010/12/09 14:28:29 1.26 @@ -6,7 +6,7 @@ # Define metadata name 'MOSES-MOBY'; - version '0.96'; + version '0.96.1'; license 'perl'; abstract 'This distribution aids in the creation of BioMOBY perl based web services.';