[MOBY-dev] moby services deployment

[Edward Kawas]

Hi Elise,

Could you also send me your impl jar as well?

Thanks

Eddie

> -----Original Message-----
> From: moby-dev-bounces at lists.open-bio.org [mailto:moby-dev-
> bounces at lists.open-bio.org] On Behalf Of Elise Larsonneur
> Sent: Monday, June 07, 2010 1:30 AM
> To: Core developer announcements
> Subject: Re: [MOBY-dev] moby services deployment
> 
> Hi Eddie !
> 
> Here we will found a dashboard image before launching the deployment.
> The hostname "localhost" and port "8080" gave  the same result (service
"jar"
> missing)
> 
> Thanks.
> 
> Elise
> 
> 
> 
> 
> Edward Kawas wrote:
> > Hi Elise,
> >
> > I just tried generating java services with dashboard. I took a clean
> > Ubuntu image, downloaded java 1.6 and Biomoby cvs source code. I built
> > and ran dashboard. I opened the MoSeS generator and selected a service
> > and then proceeded to generate datatypes, followed by generate
> > services. I then hit the deploy button (expecting it to fail because I
> > don't have an instance of tomcat running). I did not see any error about
a
> missing services.jar.
> >
> > Could you please send me a screen shot of your MoSeS panel just before
> > you hit the deploy button?
> >
> > Thanks,
> >
> > Eddie
> >
> >
> >> -----Original Message-----
> >> From: moby-dev-bounces at lists.open-bio.org [mailto:moby-dev-
> >> bounces at lists.open-bio.org] On Behalf Of Elise Larsonneur
> >> Sent: Friday, June 04, 2010 1:46 AM
> >> To: Core developer announcements
> >> Subject: Re: [MOBY-dev] moby services deployment
> >>
> >> Re !
> >>
> >> In fact, the problem is that the task *-find-services* (in
> >> deployBuil.xml
> >>
> > file)
> >
> >> find a service called "jar". Where do this task retrieve the service
> >> names
> >>
> > ?
> >
> >> dashboard console with further messages :
> >>
> >> Selected services:
> >>     Solstis_getAuthor/avilin05.avignon.inra.fr
> >>
> >> -find-services:
> >> [Services names] *Solstis_getAuthor,jar *
> >> <---------------------------------problem : service called "jar"
> >>
> >> jar-datatypes:
> >>       [jar] Building jar:
> >> /home/av07/gafl/elarsonneur/workspace/jMoby/build/lib/biomoby-
> >> datatypes.jar
> >>
> >> deploy-remote:
> >>     [mkdir] Created dir:
> >> /tmp/mobyremotedeploy-elarsonneur/null117677270/moby-services-to-
> >> deploy-2010-06-04
> >>
> >> create-wsdd:
> >> [Value property src.webapps]
> >>
> /home/av07/gafl/elarsonneur/workspace/jMoby/src/webapps/standard.ws
> >> dd.template}
> >> [Value property impl.class] impl.class [Value property
> >> service.service_name] *service.Solstis_getAuthor* [Create
> >> Solstis_getAuthor.wsdd] Copying 1 file to /tmp/mobyremotedeploy-
> >> elarsonneur/null117677270/moby-services-to-deploy-2010-06-04/deploy-
> >> wsdd
> >>
> >> create-wsdd:
> >> [Value property src.webapps]
> >>
> /home/av07/gafl/elarsonneur/workspace/jMoby/src/webapps/standard.ws
> >> dd.template}
> >> [Value property impl.class] impl.class [Value property
> >> service.service_name] *service.jar*
> >>
> >> BUILD FAILED
> >>
> /home/av07/gafl/elarsonneur/workspace/jMoby/xmls/deployBuild.xml:311:
> >> The following error occurred while executing this line:
> >>
> /home/av07/gafl/elarsonneur/workspace/jMoby/xmls/deployBuild.xml:376:
> >> The following error occurred while executing this line:
> >>
> /home/av07/gafl/elarsonneur/workspace/jMoby/xmls/deployBuild.xml:229:
> >> Property 'service.jar' is not defined.
> >>
> >>
> >>
> >> *TARGET   -find-services :*
> >> <!--
> >>
> ==========================================================
> >> ======== -->
> >> <!-- This target creates a comma-delimited list of names of services,
> >>
> > -->
> >
> >> <!-- taken from properties: service.*,  and fills it in property
> >>
> > -->
> >
> >> <!-- 'services.list'
> >>
> > -->
> >
> >> <!--
> >>
> ==========================================================
> >> ======== --> <target name="-find-services">
> >>   <propertyselector
> >>     property="services.list"
> >>     delimiter=","
> >>     match="service\..*?([^.]+)$"
> >>     select="\1"
> >>     casesensitive="false" />
> >>   <fail unless="services.list">-
> >>
> >>      No list of service names found.
> >>      ===============================
> >>      Each service that you want to deploy should be defined
> >>      by a property of the following form (parts in upper-cases should
be
> >>      replaced by the real values):
> >>         service.SERVICE-NAME = IMPLEMENTATION-CLASS-NAME
> >>
> >>      Each service that you want to undeploy can be defined in the same
> >>      way (implementation class is not needed), or simpler by creating
> >>      a property 'services.list' containing a comma-delimited list of
> >>      names of services to be undeployed.
> >>   </fail>
> >>   <echo message="${services.list}" taskname="Services names"/>
> >> </target>
> >>
> >>
> >>
> >>
> >> Thanks.
> >>
> >> Elise Larsonneur.
> >>
> >> Bioinformatics trainee.
> >> UR GAFL
> >> INRA Avignon
> >> France
> >>
> >>
> >>
> >>
> >>
> >>
> >
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> >