[MOBY-dev] php client for biomoby services

Edward Kawas edward.kawas at gmail.com
Tue Jul 29 14:56:04 UTC 2008


Hi Pierre,

Take a look at the following example that someone created at a TIGR
workshop.

https://biomoby.tigr.org/wiki/index.php/JCVI_Workshop#::_Step_5_-_how_to_cre
ate_a_MOBY_client_in_PHP_::

This example did work at the time and may still do the trick.

Eddie

-----Original Message-----
From: moby-dev-bounces at lists.open-bio.org
[mailto:moby-dev-bounces at lists.open-bio.org] On Behalf Of Pierre-Yves Chibon
Sent: July-29-08 2:09 AM
To: MOBY-dev at lists.open-bio.org
Subject: [MOBY-dev] php client for biomoby services

Dear list,

We have been trying to make a php client for a simple biomoby web 
service that we developed few days ago.
We are facing a problem in the creation of the input XML. We think that 
using php soap library we create soap XML and not moby XML. Which 
obviously returns an error.

Has anyone of you ever try to make a simple client in php or just even 
call a bioMoby service via php ?

Below is the input that is sent to our service and the XML retrieve from 
that service

Thanks for your help,
Best regards,

Pierre


input:
<?xml version="1.0" encoding="UTF-8"?>
<SOAP-ENV:Envelope 
xmlns:SOAP-ENV="http://schemas.xmlsoap.org/soap/envelope/" 
xmlns:ns1="http://avilin05.avignon.inra.fr" 
xmlns:xsd="http://www.w3.org/2001/XMLSchema" 
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" 
xmlns:SOAP-ENC="http://schemas.xmlsoap.org/soap/encoding/" 
SOAP-ENV:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/"><SOAP-ENV
:Body><ns1:Solstis_getProject><data 
xsi:type="xsd:string">a:1:{s:12:"Solstis_User";a:3:{s:8:"userName";s:4:"test
";s:8:"password";s:4:"test";s:5:"email";s:12:"test at test.fr";}}</data></ns1:S
olstis_getProject></SOAP-ENV:Body></SOAP-ENV:Envelope>

output:
<?xml version="1.0" encoding="utf-8"?><soapenv:Envelope 
xmlns:soapenv="http://schemas.xmlsoap.org/soap/envelope/" 
xmlns:xsd="http://www.w3.org/2001/XMLSchema" 
xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"><soapenv:Body><ns1:Sol
stis_getProjectResponse 
soapenv:encodingStyle="http://schemas.xmlsoap.org/soap/encoding/" 
xmlns:ns1="http://avilin05.avignon.inra.fr"><Solstis_getProjectReturn 
xsi:type="xsd:string">&lt;?xml version=&quot;1.0&quot; 
encoding=&quot;UTF-8&quot;?&gt;
&lt;moby:MOBY xmlns:moby=&quot;http://www.biomoby.org/moby&quot;&gt;
   &lt;moby:mobyContent&gt;
     &lt;moby:serviceNotes&gt;
       &lt;moby:mobyException moby:severity=&quot;error&quot;&gt;
         &lt;moby:exceptionCode&gt;600&lt;/moby:exceptionCode&gt;
         &lt;moby:exceptionMessage&gt;AN ERROR OCCURED DURING THE 
SERVICE EXECUTION: Error in the XML input.
SystemID: null
Line (perhaps): 1
Column: 1&lt;/moby:exceptionMessage&gt;
       &lt;/moby:mobyException&gt;
     &lt;/moby:serviceNotes&gt;
   &lt;/moby:mobyContent&gt;
&lt;/moby:MOBY&gt;

</Solstis_getProjectReturn></ns1:Solstis_getProjectResponse></soapenv:Body><
/soapenv:Envelope>

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