[MOBY-dev] Problem with MobyNamespace.getNamespace

Paul Gordon gordonp at ucalgary.ca
Wed Jul 16 20:43:02 UTC 2008


Hi Andreas,

I've updated MobyNamespace to use Eddie's new caching mechanism, and it 
seems to work again.  You'll ned to do a CVS update for the whole the 
moby-live/Java/src/main directory. Please let me know if you have any 
more trouble.  I will be updating MobyDataType and MobyServiceType 
similarly.

Regards,

Paul

Andreas Groscurth wrote:
> Hi,
>
> I'm using the method MobyNamespace.getNamespace(String ns) in the 
> jmoby api to retrieve the MobyNamespace for a given string. 
> Unfortunately this method is not working anymore correctly. E.g. if i 
> use PMID as input (which is a namespace) i get null back from this 
> method.
>
> I tested it with PDB, AFAWE_ID, PMID and UniProt, which all are 
> namespaces.
>
> The java code I'm using is some weeks old and it worked as far as i 
> know for a long long time - why not now ?
>
> If i call http://biomoby.org/RESSOURCES/MOBY-S/Namespaces i get the 
> rdf in which I do find e.g. PMID... but still the method above returns 
> null.
>
> any ideas ?
>
> thx
> andreas
> _______________________________________________
> MOBY-dev mailing list
> MOBY-dev at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/moby-dev
>
>



More information about the MOBY-dev mailing list