[MOBY-dev] Problems using serviceInputParser method when the mobyservice receives multiple Simple inputs

[Jose Manuel Rodriguez]

Hi everyone,

I am executing a MOBY services in Perl which needs multiple Simple inputs.
To extract the MOBY messages, when the service are called, I am using 
the "serviceInputParser" but I have seen that the returned hashref which 
contains the Simple inputs is wrong. I mean, the hashref

,whose structure is "$inputs->{$queryID}->{articleName}",

has always empty articleName value. That means the articleName of Simple 
Object is not obtained correctly. (if we have multiple simple inputs in 
one mobyData, the hashref returned by "serviceInputParser" will contain 
the last MOBY Object).



I have been checking the code and I have seen in the method 
"createFromDOM" from "MOBY::Client::SimpleArticle" file that the 
'articleNames' attribute is not extracted when this belongs to the 
namespace of "moby".


my $attr = $dom->getAttributeNode( 'articleName' );
my $articleName = $attr ? $attr->getValue : "";


Here you are one solution in this particular problem:

my $attr = $dom->getAttributeNodeNS( 'http://www.biomoby.org/moby', 
'articleName' );
$attr = $dom->getAttributeNode( 'articleName' ) unless defined $attr;
my $articleName = $attr ? $attr->getValue : "";



(but I think this is one of more problems regarding MOBY namespaces)

Best Regards,
José.

-- 
José Manuel Rodríguez Carrasco            e-mail: jmrodriguez at cnio.es
Tlfn:    (+34) 91 732 80 00 ext: 2256     Fax:    (+34) 91 224 69 76
Bioinformatic Unit
Spanish National Cancer Center (CNIO) http://www.cnio.es
Zip Code: 28029
Adress: C/. Melchor Fernandez Almagro nº 3, Madrid (Spain) 


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