[MOBY-dev] Getting out from XML.... Bug in MobyContentInstance ?

[Andreas Groscurth]

Hi all,

I call a service with Pauls 'client'

MobyRequest request = new MobyRequest(central);
request.setService(service);
request.setInput(new MobyDataObject("Global_Keyword", keyword));
MobyContentInstance instance = request.invokeService();

in the docu it says via MobyContentInstance I can retrieve my data... but it 
doesnt.

printling the object via println i get the following xml

<moby:mobyContent moby:authority="mips.gsf.de">
    <moby:serviceNotes><moby:Notes>This service retrieves all AGI_Locus Codes 
related to a given keyword via BioRS from MAtDB (MIPS Arabidopsis thaliana 
database)</moby:Notes></moby:serviceNotes>    
<moby:mobyData queryID="1">
	<moby:Collection xmlns:moby="http://www.biomoby.org/moby" 	
		moby:articleName="result_codes">
		<Simple><Object articleName="" namespace="AGI_LocusCode" id="At2g42410"/>
		</Simple>
		<Simple><Object articleName="" namespace="AGI_LocusCode" id="At3g23130"/>
		</Simple>
		<Simple><Object articleName="" namespace="AGI_LocusCode" id="At4g17810"/>
		</Simple>
	</moby:Collection>
</moby:mobyData>          </moby:mobyContent>

I debugged the MobyContentInstance and apparently in the line

NodeList collections = MobyPrefixResolver.getChildElements(dataGroupTag, 
"Collection");

and after, it should parse the collection - put it doesnt.... the result is

-- 
Andreas Groscurth
Diplom Bioinformatik - PhD Student
Max Planck Institute for Plant Breeding Research
Carl-von-Linné-Weg 10
50829 Cologne
Germany
E-mail:    groscurt at mpiz-koeln.mpg.de
Phone:    +49(0)221-5062-447