[MOBY-dev] Biomoby scavenger not being loaded in taverna

Mark Wilkinson markw at illuminae.com
Tue Dec 20 16:26:48 UTC 2005


Of course, an Amrerican pundit suggested yesterday that all Canadians 
are "retarted", so Eddie and I might just not be understanding the 
problem ;-)

M



Edward Kawas wrote:

>I just loaded up Taverna and the Moby scavenger works. Perhaps you should
>try again.
>
>Eddie
>
>-----Original Message-----
>From: moby-dev-bounces at biomoby.org [mailto:moby-dev-bounces at biomoby.org] On
>Behalf Of Arnaud Kerhornou
>Sent: Tuesday, December 20, 2005 8:14 AM
>To: taverna-users at lists.sourceforge.net; mobydev
>Subject: [MOBY-dev] Biomoby scavenger not being loaded in taverna
>
>Hi
>
>I can not load the biomoby scavenger in teverna 1.3.1 right now, can someone
>have a look at this ?
>
>/Creating biomoby scavenger : 
>'http://mobycentral.icapture.ubc.ca/cgi-bin/MOBY05/mobycentral.pl'
>...
>Failed: Connection timed out
>[Ljava.lang.StackTraceElement;@10e98d8
>org.embl.ebi.escience.scuflui.workbench.ScavengerCreationException: 
>Could not retrieve and or process RDF document for BioMoby Objects
>        at
>org.biomoby.client.taverna.plugin.BiomobyScavenger.<init>(BiomobyScavenger.j
>ava:189)
>        at
>org.embl.ebi.escience.scuflui.workbench.ScavengerTree$DefaultScavengerLoader
>Thread.run(ScavengerTree.java:327)
>Caused by: java.lang.NullPointerException
>        at
>org.biomoby.client.taverna.plugin.BiomobyScavenger.<init>(BiomobyScavenger.j
>ava:185)
>        ... 1 more/
>
>thanks
>Arnaud
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>
>  
>





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