[moby] [MOBY-dev] MOBY Central now breaks Java

Nina Opushneva opushneva at yahoo.ca
Fri Dec 17 18:40:23 UTC 2004


Hi Mark,

Do you have the highest log level on the Apache
server?
Maybe it's the problem you have not report about the
error.

Nina


--- Mark Wilkinson <mwilkinson at mrl.ubc.ca> wrote:

> The strange thing is that the error you are
> reporting is not appearing
> in the server logs...?  Are you getting back a
> partial message, or is it
> a 500 error?
> 
> M
> 
> 
> On Thu, 2004-12-16 at 12:55, Mark Wilkinson wrote:
> > Can you send me the message that it is choking on?
>  (i.e. the
> > on-the-wire XML).  I'll send it directly and
> follow what's happening in
> > trace mode.
> > 
> > M
> > 
> > 
> > On Thu, 2004-12-16 at 12:22, Paul Gordon wrote:
> > > Nope, using the main server and it's still
> broken.  There must be 
> > > something about the way Perl sets up a SOAP
> client request that the 
> > > server Perl parser is expecting, but Axis does
> not provide.  The problem 
> > > is not (primarily) that malformed XML is sent
> back from the server, but 
> > > that it does not properly read the input request
> XML (instead of a 
> > > string it tries to parse a hash ref, probably an
> object handle, at 
> > > MOBY::Central.pm line 2277).
> > > 
> > > This may in fact be a separate issue from the
> CentralImpl.java problem, 
> > > but I can't tell until the response is valid XML
> (i.e. the default 
> > > Apache 500 error page is removed from the
> response).
> > > 
> > > Mark Wilkinson wrote:
> > > 
> > > >Hi Paul, 
> > > >
> > > >Are you certain that it is still malformed?  I
> think we fixed that
> > > >problem this morning.
> > > >
> > > >... oh.... wait... it may be that you are
> hitting the test server.  Try
> > > >it again now that I have restarted it (yes,
> Phil, sometimes a restart
> > > >DOES solve the problem ;-) )
> > > >
> > > >If it is still sending out malformed XML I
> would be surprised, since it
> > > >isn't breaking the Perl parsers...???
> > > >  
> > > >
> > > 
> > > _______________________________________________
> > > MOBY-dev mailing list
> > > MOBY-dev at biomoby.org
> > > http://www.biomoby.org/mailman/listinfo/moby-dev
> -- 
> Mark Wilkinson
> Assistant Professor (Bioinformatics)
> Dept. Medical Genetics, UBC, Canada
> 
> _______________________________________________
> MOBY-dev mailing list
> MOBY-dev at biomoby.org
> http://www.biomoby.org/mailman/listinfo/moby-dev
> 


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