[EMBOSS] Diversity / p-distance

Jon Ison jison at ebi.ac.uk
Tue Feb 17 13:46:07 UTC 2009


Hi Steve

I don't think so.  You could have a look at:
http://emboss.sourceforge.net/apps/cvs/embassy/phylipnew/

Any maybe:
http://emboss.sourceforge.net/apps/cvs/emboss/apps/distmat.html

If you do write something new in C, please let's have the code
so it can be incorporated.

Cheers

Jon




> Hi,
>
> Is there an EMBOSS tool that that can calculate p-distance as defined in
> http://evolgen.biol.metro-u.ac.jp/MEGA/manual/Distance.html?
>
> I can probably code something to do it but I thought I would ask first.:-)
>
> Kind regards and thanks,
>
> Steve
> ------------------------------------------------------------------
> Medical Sciences Division
> Weatherall Institute of Molecular Medicine/Sir William Dunn School
> Oxford University
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