From pmr at ebi.ac.uk  Tue Aug 25 06:59:35 2009
From: pmr at ebi.ac.uk (Peter Rice)
Date: Tue, 25 Aug 2009 11:59:35 +0100
Subject: [emboss-announce] EMBOSS patch 1-2 for 6.1.0
Message-ID: <4A93C417.2070502@ebi.ac.uk>

A patch for EMBOSS 6.1.0 is on the FTP server. This fixes a problem with 
reading the new UniProt/SwissProt description line. The bug is in extending 
strings within lists, so it may have had other effects. We recommend 
patching your EMBOSS installations as several of the new format SwissProt 
entries are unreadable

The files are on our FTP server ftp://emboss.open-bio.org/pub/EMBOSS/fixes
with a patch file and instructions in the patches subdirectory.

Fix 2. EMBOSS-6.1.0/ajax/ajmem.h
        EMBOSS-6.1.0/ajax/ajstr.c
        EMBOSS-6.1.0/ajax/ajstr.h
        EMBOSS-6.1.0/nucleus/embaln.c

24-Aug-2009: Fix string extension so that pointers in lists remain valid.
              This fixes a bug in processing SwissProt complex descriptions.
              Fix definition of AJRESIZE0 macro.
              Fix processing of first match in a prophet profile alignment

regards,

Peter Rice


From pmr at ebi.ac.uk  Tue Aug 25 10:59:35 2009
From: pmr at ebi.ac.uk (Peter Rice)
Date: Tue, 25 Aug 2009 11:59:35 +0100
Subject: [emboss-announce] EMBOSS patch 1-2 for 6.1.0
Message-ID: <4A93C417.2070502@ebi.ac.uk>

A patch for EMBOSS 6.1.0 is on the FTP server. This fixes a problem with 
reading the new UniProt/SwissProt description line. The bug is in extending 
strings within lists, so it may have had other effects. We recommend 
patching your EMBOSS installations as several of the new format SwissProt 
entries are unreadable

The files are on our FTP server ftp://emboss.open-bio.org/pub/EMBOSS/fixes
with a patch file and instructions in the patches subdirectory.

Fix 2. EMBOSS-6.1.0/ajax/ajmem.h
        EMBOSS-6.1.0/ajax/ajstr.c
        EMBOSS-6.1.0/ajax/ajstr.h
        EMBOSS-6.1.0/nucleus/embaln.c

24-Aug-2009: Fix string extension so that pointers in lists remain valid.
              This fixes a bug in processing SwissProt complex descriptions.
              Fix definition of AJRESIZE0 macro.
              Fix processing of first match in a prophet profile alignment

regards,

Peter Rice