[DAS2] Ontologies in DAS/2

Allen Day allenday at ucla.edu
Wed Feb 8 03:57:05 UTC 2006


Hi Chris,

> Why not just define a qname for every idspace? This is the standard way 
> of doing this in XML

Can you give a concrete example of this?  a search for "qname idspace"
returns a single godatabase.org result.



Anyway, I have stripped out the id= attributes from the <term/> and
<typedef/> elements.  You can see valid (by your DTD) obo xml produced
from the das server here:

Entire SO:
http://das.biopackages.net/das/ontology/obo/1/ontology/SO?format=legacy1

SO "exon" record:
http://das.biopackages.net/das/ontology/obo/1/ontology/SO/0000147?format=legacy1

-Allen



More information about the DAS2 mailing list