[DAS2] Re: Apollo and DAS/2 priorities

[Allen Day]

On Tue, 7 Feb 2006, Andrew Dalke wrote:

> Allen
> > The XML is now as you requested, please confirm.
> 
> Missing the namespace declaration.  You have
> 
> 
> <SOURCES
>        xmlns:xlink="http://www.w3.org/1999/xlink"
>        xml:base="http://das.biopackages.net/das/genome/">
> 
> should be
> 
> <SOURCES
>        xmlns="http://www.biodas.org/ns/das/genome/2.00"
>        xmlns:xlink="http://www.w3.org/1999/xlink"
>        xml:base="http://das.biopackages.net/das/genome/">

done

> 
> The <PROP> element goes after the CATEGORY.  (Which I want to
> rename back to CAPABILITY.)

done

> 
> The ASSEMBLY element no longer exists.

done

> 
> Fixing those by hand,
> 
> * file:///Users/dalke/cvses/das/das2/scratch/allen_sources.xml:7:84: 
> error: attribute "writeable" not allowed at this point; ignored
> * file:///Users/dalke/cvses/das/das2/scratch/allen_sources.xml:7:84: 
> error: attribute "taxon" not allowed at this point; ignored
> 
> There is no more 'writeable' (that's, IMO) something to be decided
> as part of the writeback spec.  It might be that we have a
> 
> <CAPABILITY type="writeback" />
> 
> and the existence of that indicate writeability.

i have not made the change if this is an IMO.

> 
> It's also "taxid" and not "taxon".  I used "taxid" because that's
> what NCBI uses for their data.

done

-Allen

> 
> > There are probably also some other Content-Type headers that need to be
> > changed for the other responses -- let me know if you spot them.
> 
> Haven't gotten that far yet.
> 
> 					Andrew
> 					dalke at dalkescientific.com
> 
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