[BioSQL-l] SeqFeature scores

[Hilmar Lapp]

Sorry for being slow to respond to this. Please file it against  
Bioperl-db. It needs to be stored in seqfeature_qualifier_value as the  
score really only applies as an attribute to computed features.

The reason it doesn't get stored right now is that BioPerl treats it  
as a first-class property rather than an attribute. So Bioperl-db  
needs to map between the two models.

	-hilmar

On Oct 15, 2008, at 5:50 PM, Mark Johnson wrote:

> On Tue, Oct 14, 2008 at 12:28 PM, Chris Fields  
> <cjfields at illinois.edu> wrote:
>
>> I think open a new bug so we can track it.  Personally I'm not sure  
>> how we'd
>> store score data in BioSQL.  Is 'score' within the schema?  I  
>> suppose we
>> could add it as a specific tag value but that seems potentially  
>> hackish and
>> prone to naming conflicts.
>>
>> chris
>
> Should I open it against BioSQL or bioperl-db?  I'd guess the latter
> unless we need schema changes?
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: Hilmar Lapp  -:-  Durham, NC  -:-  hlapp at gmx dot net :
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