From osaka.k.w at gmail.com Sat Mar 9 02:06:19 2013 From: osaka.k.w at gmail.com (Kai Wang) Date: Sat, 9 Mar 2013 16:06:19 +0900 Subject: [Biosoap-l] SOAP Based BLAST help Message-ID: Dear all, I am a user of SOAP based BLAST . ftp://ftp.ncbi.nlm.nih.gov/blast/web_services/soap_client.pl But I cannot set a evalue cutoff using it, How can I do this? Besides, when I got the BLAST search results, I find they are in XML format. How can I get a tab separated result? And How can I use a paramset like "-e 1e-10 -b 5 -m 8" in the perl script? Any one could give me some help? Best wishes, Kai Wang From osaka.k.w at gmail.com Sat Mar 9 07:06:19 2013 From: osaka.k.w at gmail.com (Kai Wang) Date: Sat, 9 Mar 2013 16:06:19 +0900 Subject: [Biosoap-l] SOAP Based BLAST help Message-ID: Dear all, I am a user of SOAP based BLAST . ftp://ftp.ncbi.nlm.nih.gov/blast/web_services/soap_client.pl But I cannot set a evalue cutoff using it, How can I do this? Besides, when I got the BLAST search results, I find they are in XML format. How can I get a tab separated result? And How can I use a paramset like "-e 1e-10 -b 5 -m 8" in the perl script? Any one could give me some help? Best wishes, Kai Wang