[BioRuby] The fastest...

Pjotr Prins pjotr.public14 at thebird.nl
Fri Jan 31 14:32:16 UTC 2014


Hi everyone,

A few years back we put out a GSoC project for the fastest GFF parser.
This led to a GFF3 parser and sambamba. Sambamba is still going
strong!

I was wondering who has a specific need for a parallelized fast parser
for NGS type big data, with maybe RDF or SQL output. We can add that
as a project proposal for GSoC this year.

Pj.




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