[BioRuby] Unique reads

[Michael Paulini]

On 16/01/12 06:24, Mic wrote:
> Hello,
> I read in many papers that they made unique reads before the reads
> were align and later on the SNPs were called. However, I could not find out
> how they do it.
>
> Which tool can be used to do it?
>
> Thank you in advance.
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WU-Blast/AB-Blast had a tool to collapse identical fasta entries called 
nrdb.
But you can write your own by comparing the sequences.

M


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