[BioRuby] [Open-bio Board] Buildbot on testing.open-bio.org

Tiago Antão tiagoantao at gmail.com
Tue Nov 1 20:21:31 UTC 2011


2011/11/1 Tiago Antão <tiagoantao at gmail.com>:
> On Tue, Nov 1, 2011 at 2:48 PM, Naohisa GOTO
> <ngoto at gen-info.osaka-u.ac.jp> wrote:
>>  % ruby test/runner.rb
>
> I run with this and now it works fine: ie reports an error. The error
> is just that I do not have the XML parser installed.
> Please see:
> http://testing.open-bio.org/bioruby/waterfall

Is anyone interested in receiving emails with errors? Should I send
them to the list? At this initial stage I would recommend sending to a
just few developers...

There is now a potential real error:
  1) Failure:
test_convert(Bio::FuncTestTogoWSREST)
[./test/functional/bio/io/test_togows.rb:120]:
Exception raised:
Class: <Errno::EINVAL>
Message: <"Invalid argument - connect(2)">
---Backtrace---
/usr/lib/ruby/1.8/net/http.rb:560:in `initialize'
/usr/lib/ruby/1.8/net/http.rb:560:in `open'
/usr/lib/ruby/1.8/net/http.rb:560:in `connect'
/usr/lib/ruby/1.8/timeout.rb:53:in `timeout'
/usr/lib/ruby/1.8/timeout.rb:101:in `timeout'
/usr/lib/ruby/1.8/net/http.rb:560:in `connect'
/usr/lib/ruby/1.8/net/http.rb:553:in `do_start'
/usr/lib/ruby/1.8/net/http.rb:542:in `start'
/usr/lib/ruby/1.8/net/http.rb:1035:in `request'
/usr/lib/ruby/1.8/net/http.rb:845:in `post'
./lib/bio/command.rb:702:in `http_post_form'
./lib/bio/io/togows.rb:414:in `post_data'
./lib/bio/io/togows.rb:305:in `convert'
./test/functional/bio/io/test_togows.rb:121:in `test_convert'
./test/functional/bio/io/test_togows.rb:120:in `test_convert'




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