[BioRuby] SRA downloader

Peter Cock p.j.a.cock at googlemail.com
Tue Feb 15 13:18:47 UTC 2011


On Tue, Feb 15, 2011 at 10:25 AM, Raoul Bonnal <bonnalraoul at ingm.it> wrote:
> Next time a little bit of research  :-(
>
> http://phylogenomics.blogspot.com/2011/02/though-i-generally-love-ncbi.html?showComment=1297359206321#c7246439301219289057
>

Still no official announcement yet though...

> On 15/feb/2011, at 10.37, Raoul Bonnal wrote:
>
>> Hey Guys,
>> this is a new plugin to download sra archives in an easy way, I hope :-)
>>
>> Why ? because I need to download some file from SRA and I don't want
>> to type the wget/curl command and I want to explore the ftp from command
>> line, then because I need to start the downloads in background on a remote
>> server.
>>

You might be interested in this solution too,

http://fungalgenomes.org/blog/2011/02/a-hyphaltip-get-a-bunch-of-sra-data/

Peter




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