[BioRuby] FW: installing bio::graphics

[Robert Citek]

On Thu, Feb 14, 2008 at 7:39 PM, jan aerts (RI) <jan.aerts at bbsrc.ac.uk> wrote:
> (Apparently Outlook Web Access does not automatically send back to a mailing list... So here you are.)

Thanks.

>  -----Original Message-----
>  From: jan aerts (RI)
>  Sent: Fri 15/02/2008 01:38
>  To: Robert Citekt'' libyaml-ruby
>  Subject: RE: [BioRuby] installing bio::graphics
>
>  Hi Robert.
>
>  I'm testing things out here, and all seems to work... Could you tell me what version of rubygems you're using ("gem --version")? If it's not 1.0.1, you can upgrade using "sudo gem update --system".

$ gem --version
0.9.4

$ sudo gem update --system
...

$ gem --version
/usr/bin/gem:23: uninitialized constant Gem::GemRunner (NameError)

That does not look good.

>  Then can you try the following?
>   ruby -rubygems -e "require 'bio'; require 'bio-graphics' ; puts 'hello' "

$ ruby -rubygems -e "require 'bio'; require 'bio-graphics' ; puts 'hello' "
/usr/local/lib/site_ruby/1.8/rubygems/custom_require.rb:27:in
`gem_original_require': no such file to load -- bio-graphics
(LoadError)
        from /usr/local/lib/site_ruby/1.8/rubygems/custom_require.rb:27:in
`require'
        from -e:1

That doesn't look good, either.

Back to more Googling and reading.

Regards,
- Robert