[BioRuby] Bio::Sequence forces a DNA sequence to lowercase?

Robert Citek robert.citek at gmail.com
Fri Feb 1 15:48:00 UTC 2008


On Jan 30, 2008 10:10 AM, Jan Aerts <jan.aerts at bbsrc.ac.uk> wrote:
> So the 'right' way to do it is to create a Bio::Sequence object as you
> did above and then attach a Bio::Feature object to it describing the
> start codon.

On Feb 1, 2008 9:39 AM, Adam Kraut <adamnkraut at gmail.com> wrote:
> I am also new to Bioruby so there may be a more fitting solution that's
> already been discussed.

Thanks, Jan and Adam.  Jan's solution is probably the right way.
Unfortunately, I'm new enough to ruby that I'm not sure how to make
that work for me.  Adam's solution may not be the "right" way, but it
works good enough for me for now.

Again, thanks.

Regards,
- Robert



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