From ngoto ˇ÷ gen-info.osaka-u.ac.jp Thu Jul 2 01:21:05 2015 From: ngoto ˇ÷ gen-info.osaka-u.ac.jp (Naohisa Goto) Date: Thu, 02 Jul 2015 10:21:05 +0900 Subject: [BioRuby-ja] BioRuby 1.5.0 released Message-ID: <20150702102103.6E49.EEF6E030@gen-info.osaka-u.ac.jp> Hi, all, We are pleased to announce the release of BioRuby 1.5.0. This new release includes support of recent Ruby versions (Ruby 2.1 and 2.2), improvement of codes, and bug fixes. Tar.gz file: http://bioruby.org/archive/bioruby-1.5.0.tar.gz Gem file: http://bioruby.org/archive/gems/bio-1.5.0.gem We also put RubyGems pacakge at RubyGems.org. https://rubygems.org/gems/bio You can easily install by using RubyGems. First, check the version number by using search command: % gem search --remote bio and find ˇČbio (1.5.0)ˇÉ in the list. Then, % sudo gem install bio Here is a brief summary of changes. * Ruby 2.0.0, 2.1, 2.2 support. * Some features are removed because of remote service discontinuance or difficulty of code maintenance. * Refactoring of code. * Bio::SPTR is renamed as Bio::UniProtKB. * Bug fixes. In addition, many changes have been made, including incompatible changes. For more information, see RELEASE_NOTES.rdoc and ChangeLog. Acknowledgments: Thanks to all persons reporting issues and/or submitting patches. Hope you enjoy. -- Naohisa Goto ng ˇ÷ bioruby.org