[BioRuby-cvs] bioruby/lib/bio/util restriction_enzyme.rb, 1.14, 1.15

Trevor Wennblom trevor at dev.open-bio.org
Sun May 13 04:08:04 UTC 2007


Update of /home/repository/bioruby/bioruby/lib/bio/util
In directory dev.open-bio.org:/tmp/cvs-serv5059/lib/bio/util

Modified Files:
	restriction_enzyme.rb 
Log Message:
Added view_ranges parameter to indicate preservation of cut location data in results.


Index: restriction_enzyme.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/util/restriction_enzyme.rb,v
retrieving revision 1.14
retrieving revision 1.15
diff -C2 -d -r1.14 -r1.15
*** restriction_enzyme.rb	13 May 2007 01:25:25 -0000	1.14
--- restriction_enzyme.rb	13 May 2007 04:08:02 -0000	1.15
***************
*** 197,201 ****
    # 
    # Note: unrelated to Bio::RestrictionEnzyme::Range::SequenceRange::Fragment
!   Fragment = Struct.new(:primary, :complement)
  
    # Bio::RestrictionEnzyme::Fragments inherits from +Array+.
--- 197,201 ----
    # 
    # Note: unrelated to Bio::RestrictionEnzyme::Range::SequenceRange::Fragment
!   Fragment = Struct.new(:primary, :complement, :p_left, :p_right, :c_left, :c_right)
  
    # Bio::RestrictionEnzyme::Fragments inherits from +Array+.




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