[BioRuby-cvs] bioruby/lib/bio/appl/iprscan report.rb,1.7,1.8

[Mitsuteru C. Nakao]

Update of /home/repository/bioruby/bioruby/lib/bio/appl/iprscan
In directory dev.open-bio.org:/tmp/cvs-serv25166/lib/bio/appl/iprscan

Modified Files:
	report.rb 
Log Message:
* Fixed a bug in Bio::Iprscan::Report.reports_in_raw (thanks ngoto-san).


Index: report.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/appl/iprscan/report.rb,v
retrieving revision 1.7
retrieving revision 1.8
diff -C2 -d -r1.7 -r1.8
*** report.rb	16 Jul 2007 19:21:32 -0000	1.7
--- report.rb	17 Jul 2007 14:16:50 -0000	1.8
***************
*** 82,85 ****
--- 82,86 ----
            end
          end
+         yield Bio::Iprscan::Report.parse_in_raw(entry) if entry != ''
        end
      
***************
*** 260,276 ****
          @matches.map { |match|
            [self.query_id,
!                 self.crc64,
!                 self.query_length,
!                 match.method,
!                 match.accession,
!                 match.description,
!                 match.match_start,
!                 match.match_end,
!                 match.evalue,
!                 match.status,
!                 match.date,
!                 match.ipr_id,
!                 match.ipr_description,
!                 match.go_terms.map {|x| x[0] + ': ' + x[1] + ' (' + x[2] + ')' }.join(', ')
            ].join("\t")
          }.join("\n")
--- 261,277 ----
          @matches.map { |match|
            [self.query_id,
!            self.crc64,
!            self.query_length,
!            match.method,
!            match.accession,
!            match.description,
!            match.match_start,
!            match.match_end,
!            match.evalue,
!            match.status,
!            match.date,
!            match.ipr_id,
!            match.ipr_description,
!            match.go_terms.map {|x| x[0] + ': ' + x[1] + ' (' + x[2] + ')' }.join(', ')
            ].join("\t")
          }.join("\n")