[BioRuby-cvs] bioruby/doc Changes-0.7.rd,1.19,1.20

[Naohisa Goto]

Update of /home/repository/bioruby/bioruby/doc
In directory dev.open-bio.org:/tmp/cvs-serv21632/doc

Modified Files:
	Changes-0.7.rd 
Log Message:
incompatible changes in Bio::BLAST::Default and Bio::BLAST::WU are added.


Index: Changes-0.7.rd
===================================================================
RCS file: /home/repository/bioruby/bioruby/doc/Changes-0.7.rd,v
retrieving revision 1.19
retrieving revision 1.20
diff -C2 -d -r1.19 -r1.20
*** Changes-0.7.rd	2 Apr 2007 12:55:26 -0000	1.19
--- Changes-0.7.rd	21 Apr 2007 08:59:45 -0000	1.20
***************
*** 308,311 ****
--- 308,325 ----
    formmatted text instead of Array.
  
+ --- Bio::BLAST::Default::Report, Bio::BLAST::Default::Report::Hit,
+     Bio::BLAST::Default::Report::HSP, Bio::BLAST::WU::Report,
+     Bio::BLAST::WU::Report::Hit, Bio::BLAST::WU::Report::HSP
+ 
+ In 1.1.0:
+ 
+ * Hit#evalue, HSP#evalue, WU::Hit#pvalue, and WU::HSP#pvalue are
+   changed to return a Float object instead of a String object.
+ * Report#expect, Hit#bit_score, and HSP#bit_score are changed to return
+   a Float object or nil instead of a String object or nil.
+ * Following methods are changed to return an integer value or nil
+   instead of a string or nil: score, percent_identity, percent_positive,
+   percent_gaps.
+ 
  === Deleted files