[BioRuby-cvs] bioruby/lib/bio/db/kegg brite.rb,0.6,0.7

Katayama Toshiaki k at dev.open-bio.org
Tue Sep 19 05:50:47 UTC 2006


Update of /home/repository/bioruby/bioruby/lib/bio/db/kegg
In directory dev.open-bio.org:/tmp/cvs-serv31665/lib/bio/db/kegg

Modified Files:
	brite.rb 
Log Message:
* license is changed from LGPL to Ruby's


Index: brite.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/db/kegg/brite.rb,v
retrieving revision 0.6
retrieving revision 0.7
diff -C2 -d -r0.6 -r0.7
*** brite.rb	8 Sep 2005 01:22:11 -0000	0.6
--- brite.rb	19 Sep 2006 05:50:45 -0000	0.7
***************
*** 1,22 ****
  #
! # bio/db/kegg/brite.rb - KEGG/BRITE database class
! #
! #   Copyright (C) 2001 KATAYAMA Toshiaki <k at bioruby.org>
! #
! #  This library is free software; you can redistribute it and/or
! #  modify it under the terms of the GNU Lesser General Public
! #  License as published by the Free Software Foundation; either
! #  version 2 of the License, or (at your option) any later version.
! #
! #  This library is distributed in the hope that it will be useful,
! #  but WITHOUT ANY WARRANTY; without even the implied warranty of
! #  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
! #  Lesser General Public License for more details.
  #
! #  You should have received a copy of the GNU Lesser General Public
! #  License along with this library; if not, write to the Free Software
! #  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307  USA
  #
! #  $Id$
  #
  
--- 1,9 ----
  #
! # = bio/db/kegg/brite.rb - KEGG/BRITE database class
  #
! # Copyright::  Copyright (C) 2001 Toshiaki Katayama <k at bioruby.org>
! # License::    Ruby's
  #
! # $Id$
  #
  
***************
*** 24,51 ****
  
  module Bio
  
!   class KEGG
! 
!     class BRITE < KEGGDB
! 
!       DELIMITER	= RS = "\n///\n"
!       TAGSIZE	= 12
  
!       def initialize(entry)
!         super(entry, TAGSIZE)
!       end
  
!       # ENTRY
!       # DEFINITION
!       # RELATION
!       # FACTORS
!       # INTERACTION
!       # SOURCE
!       # REFERENCE
  
!     end
  
!   end
  
! end
  
--- 11,41 ----
  
  module Bio
+ class KEGG
  
! # == Note
! #
! # This class is not completely implemented, but obsolete as the original
! # database BRITE has changed it's meaning.
! #
! class BRITE < KEGGDB
  
!   DELIMITER	= RS = "\n///\n"
!   TAGSIZE	= 12
  
!   def initialize(entry)
!     super(entry, TAGSIZE)
!   end
  
!   # ENTRY
!   # DEFINITION
!   # RELATION
!   # FACTORS
!   # INTERACTION
!   # SOURCE
!   # REFERENCE
  
! end # BRITE
  
! end # KEGG
! end # Bio
  




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