[BioRuby-cvs] bioruby/doc Changes-0.7.rd,1.15,1.16

[Katayama Toshiaki]

Update of /home/repository/bioruby/bioruby/doc
In directory pub.open-bio.org:/tmp/cvs-serv2456/doc

Modified Files:
	Changes-0.7.rd 
Log Message:
* prepared for 1.0.0 release


Index: Changes-0.7.rd
===================================================================
RCS file: /home/repository/bioruby/bioruby/doc/Changes-0.7.rd,v
retrieving revision 1.15
retrieving revision 1.16
diff -C2 -d -r1.15 -r1.16
*** Changes-0.7.rd	22 Feb 2006 15:09:45 -0000	1.15
--- Changes-0.7.rd	27 Feb 2006 11:38:14 -0000	1.16
***************
*** 50,53 ****
--- 50,66 ----
  --- Bio::Sequence
  
+ Bio::Sequence is completely refactored to be a container class for
+ any sequence annotations.  Functionalities are separated into several
+ files under the lib/bio/sequence/ directory as
+ 
+   * common.rb : module provides common methods for NA and AA sequences
+   * compat.rb : methods for backward compatibility
+   * aa.rb     : Bio::Sequence::AA class
+   * na.rb     : Bio::Sequence::NA class
+   * format.rb : module for format conversion
+ 
+ Bio::Sequence is no longer a sub-class of String, instead,
+ Bio::Sequence::NA and AA inherits String directly.
+ 
  * Bio::Sequence::NA#gc_percent returns integer instead of float
  * Bio::Sequence::NA#gc (was aliased to gc_percent) is removed