[BioRuby-cvs] bioruby/lib/bio/util/restriction_enzyme/analysis cut_ranges.rb, 1.2, 1.3 sequence_range.rb, 1.2, 1.3 tags.rb, 1.2, 1.3

[Trevor Wennblom]

Update of /home/repository/bioruby/bioruby/lib/bio/util/restriction_enzyme/analysis
In directory dev.open-bio.org:/tmp/cvs-serv512/lib/bio/util/restriction_enzyme/analysis

Modified Files:
	cut_ranges.rb sequence_range.rb tags.rb 
Log Message:


Index: tags.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/util/restriction_enzyme/analysis/tags.rb,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** tags.rb	31 Dec 2006 21:50:31 -0000	1.2
--- tags.rb	1 Jan 2007 02:16:05 -0000	1.3
***************
*** 5,9 ****
  
  #require 'bio/util/restriction_enzyme/analysis/shared_information'
! require 'bio'
  
  module Bio; end
--- 5,9 ----
  
  #require 'bio/util/restriction_enzyme/analysis/shared_information'
! #require 'bio'
  
  module Bio; end

Index: cut_ranges.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/util/restriction_enzyme/analysis/cut_ranges.rb,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** cut_ranges.rb	31 Dec 2006 21:50:31 -0000	1.2
--- cut_ranges.rb	1 Jan 2007 02:16:05 -0000	1.3
***************
*** 12,20 ****
  $:.unshift(libpath) unless $:.include?(libpath)
  
! require 'bio'
  
  module Bio; end
  class Bio::RestrictionEnzyme
  class Analysis
  
  #
--- 12,21 ----
  $:.unshift(libpath) unless $:.include?(libpath)
  
! #require 'bio'
  
  module Bio; end
  class Bio::RestrictionEnzyme
  class Analysis
+ #class Analysis
  
  #

Index: sequence_range.rb
===================================================================
RCS file: /home/repository/bioruby/bioruby/lib/bio/util/restriction_enzyme/analysis/sequence_range.rb,v
retrieving revision 1.2
retrieving revision 1.3
diff -C2 -d -r1.2 -r1.3
*** sequence_range.rb	31 Dec 2006 21:50:31 -0000	1.2
--- sequence_range.rb	1 Jan 2007 02:16:05 -0000	1.3
***************
*** 12,16 ****
  $:.unshift(libpath) unless $:.include?(libpath)
  
- require 'bio/util/restriction_enzyme/analysis/tags'
  require 'bio/util/restriction_enzyme/analysis/cut_ranges'
  require 'bio/util/restriction_enzyme/analysis/horizontal_cut_range'
--- 12,15 ----