[BioRuby-cvs] bioruby/test/data/refseq nm_126355.entret,NONE,1.1

[Mitsuteru C. Nakao]

Update of /home/repository/bioruby/bioruby/test/data/refseq
In directory pub.open-bio.org:/tmp/cvs-serv11157/test/data/refseq

Added Files:
	nm_126355.entret 
Log Message:
* Initial import test data for Bio::Refseq.


--- NEW FILE: nm_126355.entret ---
LOCUS       NM_126355                615 bp    mRNA    linear   PLN 25-JAN-2005
DEFINITION  Arabidopsis thaliana Toll-Interleukin-Resistance (TIR)
            domain-containing protein (At2g03030) mRNA, complete cds.
ACCESSION   NM_126355
VERSION     NM_126355.1  GI:18395472
KEYWORDS    .
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
            rosids; eurosids II; Brassicales; Brassicaceae; Arabidopsis.
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_003071). The reference sequence was derived from
            mrna.At2g03030.1.
FEATURES             Location/Qualifiers
     source          1..615
                     /organism="Arabidopsis thaliana"
                     /mol_type="mRNA"
                     /db_xref="taxon:3702"
                     /chromosome="2"
                     /map="unknown"
                     /clone="CHR2v01212004"
                     /ecotype="Columbia"
     gene            1..615
                     /locus_tag="At2g03030"
                     /note="synonym: T17M13.20; Toll-Interleukin-Resistance
                     (TIR) domain-containing protein"
                     /db_xref="GeneID:814832"
     CDS             1..615
                     /locus_tag="At2g03030"
                     /note="domain signature TIR exists, suggestive of a
                     disease resistance protein;
                     go_function: defense/immunity protein activity [goid
                     0003793];
                     go_process: defense response signaling pathway,
                     resistance-gene dependent [goid 0009870]"
                     /codon_start=1
                     /product="Toll-Interleukin-Resistance (TIR)
                     domain-containing protein"
                     /protein_id="NP_178403.1"
                     /db_xref="GI:15227520"
                     /db_xref="GeneID:814832"
                     /translation="MTFFSPTQVFLNYRGEQLRRSFVSHLIDAFERNEINFFVDKYEQ
                     RGKDLKNLFLRIQESKIALAIFSTRYTESSWCLDELVKIKKLADKKKLHVIPIFYKVK
                     VEDVRKQTGEFGDNFWTLAKVSSGDQIKKWKEALECIPNKMGLSLGDKSSEADFIKEV
                     VKAVQCVVATIGLEEEEENHFGKKKRKDCKCELPDLKKSRTKKL"
     misc_feature    22..423
                     /locus_tag="At2g03030"
                     /note="TIR; Region: Toll - interleukin 1 - resistance"
                     /db_xref="CDD:22729"
ORIGIN
       1  atgacattct tctctcccac tcaggtgttt ttgaactaca ggggagaaca actgcgtcgc
      61  agcttcgtga gccacctcat tgatgccttt gaaaggaatg agatcaactt cttcgtagac
     121  aaatacgaac agagaggcaa agacctcaaa aatctctttc ttaggatcca agagtcgaag
     181  atcgcgcttg ccatcttctc aaccagatac acggagtcaa gctggtgttt ggatgagttg
     241  gtgaagataa agaaacttgc tgataaaaaa aaactccatg tcattccaat tttctacaag
     301  gtgaaggtag aagacgttcg aaaacagaca ggtgagtttg gtgacaactt ctggacgctg
     361  gcaaaggttt caagtggtga tcagatcaag aaatggaaag aagccttgga atgtatcccc
     421  aacaagatgg gtttgtcgtt gggagacaag agttctgaag cagatttcat caaggaagtt
     481  gttaaggcgg ttcagtgtgt tgtagcaacg attggacttg aggaagaaga agagaatcat
     541  tttgggaaaa agaagagaaa ggattgcaaa tgtgagcttc ctgatttgaa gaaaagcaga
     601  accaaaaagt tgtga
//