<div dir="ltr"><div dir="ltr">Just so everyone knows, even though those are different environments, the ubuntu app does let you work trough windows files and programs as i was trying to do initially. isn't the smartest way to do it, but is possible.<div><br></div><div>in the ubuntu app you start in home, after rootfs. to cp from ubuntu files you just need to start the path with ./.local/, and to cp from windows files you start the path with ./mnt/c/</div><div><br></div><div>so from home:</div><div><div>./.local/lib/python3.6/site-packages</div><div>./mnt/c/Users/fernanda/AppData/Local/Programs/Python/Python37  <br></div><div><br></div><div>instead of</div><div>/C/Users/fernanda/AppData/Local/Packages/CanonicalGroupLimited.UbuntuonWindows_79rhkp1fndgsc/LocalState/rootfs/home/trancoso/.local/lib/python3.6/site-packages  <br></div><br class="gmail-Apple-interchange-newline"></div><div>idk if it was something already obvious, but i wasnt able to find much about using this ubuntu app in windows</div><div><br></div><div><br></div></div></div><br><div class="gmail_quote"><div dir="ltr">Em qua, 12 de set de 2018 às 06:22, Fernanda Trancoso <<a href="mailto:fftrancoso96@gmail.com">fftrancoso96@gmail.com</a>> escreveu:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="auto"><div>hey, it did help! i thought it was able to mix environments since this ubuntu app  let me work around with the windows files, but i was wrong haha. thanks<br><br><div class="gmail_quote"><div dir="ltr">John Berrisford <<a href="mailto:jmb@ebi.ac.uk" target="_blank">jmb@ebi.ac.uk</a>> schrieb am Mi., 12. Sep. 2018, 03:17:<br></div><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div lang="EN-GB" link="#0563C1" vlink="#954F72"><div class="m_-4038120388913566605m_-3517347528753275400WordSection1"><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">Hi<u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d"><u></u> <u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">You’re mixing two different python environments. <u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d"><u></u> <u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">The python setup is completely independent of the windows setup. <u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d"><u></u> <u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">i.e. if you install python in windows then Ubuntu doesn’t know anything about it. <u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d"><u></u> <u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">To install python3 in Ubuntu<u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">Open a Ubuntu terminal then type the following<u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">sudo apt-get install python3<u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d"><u></u> <u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">you may need the following to install pip for python3<u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">sudo apt-get install python3-pip<u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d"><u></u> <u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">then <u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">sudo pip3 install biopython<u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d"><u></u> <u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">Hope this helps<u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d"><u></u> <u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d">John<u></u><u></u></span></p><p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1f497d"><u></u> <u></u></span></p><p class="MsoNormal"><b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">From:</span></b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif"> Biopython [mailto:<a href="mailto:biopython-bounces%2Bjmb" rel="noreferrer" target="_blank">biopython-bounces+jmb</a>=<a href="mailto:ebi.ac.uk@mailman.open-bio.org" rel="noreferrer" target="_blank">ebi.ac.uk@mailman.open-bio.org</a>] <b>On Behalf Of </b>Fernanda Trancoso<br><b>Sent:</b> 12 September 2018 00:46<br><b>To:</b> biopython mailing list <<a href="mailto:biopython@biopython.org" rel="noreferrer" target="_blank">biopython@biopython.org</a>><br><b>Subject:</b> [Biopython] pip install biopython in ubuntu at windows<u></u><u></u></span></p><p class="MsoNormal"><u></u> <u></u></p><div><div><div><div><p class="MsoNormal">Hey there, good night/day/afternoon.<u></u><u></u></p></div><div><p class="MsoNormal">can someone help me?<u></u><u></u></p></div><div><p class="MsoNormal"><u></u> <u></u></p></div><div><p class="MsoNormal">im having problems installing biopython using ubuntu at windows. <u></u><u></u></p><div><p class="MsoNormal">when i use pip install it goes to<u></u><u></u></p></div><div><p class="MsoNormal"><u></u> <u></u></p></div><div><p class="MsoNormal">AppData/Local/Packages/CanonicalGroupLimited.UbuntuonWindows_79rhkp1fndgsc/LocalState/rootfs/home/trancoso/.local/lib/python2.7/site-packages<u></u><u></u></p></div><div><p class="MsoNormal"><u></u> <u></u></p></div><div><p class="MsoNormal">but i installed python 3.7 at <u></u><u></u></p></div><div><p class="MsoNormal"><u></u> <u></u></p></div><div><p class="MsoNormal">C:/Users/fernanda/AppData/Local/Programs/Python/Python37<u></u><u></u></p></div><div><p class="MsoNormal"><u></u> <u></u></p></div><div><p class="MsoNormal">and i dont have access to /rootfs/<u></u><u></u></p></div><div><p class="MsoNormal">i searched for similar problems but couldnt find answers for it.<u></u><u></u></p></div><div><p class="MsoNormal"><u></u> <u></u></p></div><div><p class="MsoNormal">thanks!<u></u><u></u></p></div><div><p class="MsoNormal"><u></u> <u></u></p></div><div><p class="MsoNormal"><u></u> <u></u></p><div><p class="MsoNormal"><u></u> <u></u></p></div><p class="MsoNormal">-- <u></u><u></u></p><div><div><div><div><p class="MsoNormal">Fernanda Fontes Trancoso<u></u><u></u></p><div><p class="MsoNormal">Aluna de Graduação em Ciências Biológicas na UFMG<u></u><u></u></p></div><div><p class="MsoNormal"><span style="font-size:9.5pt">+55 (31) 9156-6485</span><u></u><u></u></p></div></div></div></div></div></div></div></div></div></div></div></div></blockquote></div></div></div>
</blockquote></div><br clear="all"><div><br></div>-- <br><div dir="ltr" class="gmail_signature" data-smartmail="gmail_signature"><div dir="ltr"><div><div dir="ltr">Fernanda Fontes Trancoso<div>Aluna de Graduação em Ciências Biológicas na UFMG</div><div><span style="font-size:12.8px">+55 (31) 9156-6485</span><br></div></div></div></div></div>