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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Hi Leighton,<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">No worries, thanks for your reply.<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Essentially what I have are two different contigs for one draft genome that I want to align to a single contig for another draft genome.
<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Peter has also pasted this example:<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US"><a href="https://www.biostars.org/p/94400/">https://www.biostars.org/p/94400/</a><o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">are these likely being manually edited then?<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">thanks again for your help<o:p></o:p></span></p>
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<p class="MsoNormal"><span style="font-size:11.0pt;font-family:"Calibri",sans-serif;color:#1F497D;mso-fareast-language:EN-US">Adam<o:p></o:p></span></p>
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<p class="MsoNormal" style="margin-left:36.0pt"><b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif">From:</span></b><span lang="EN-US" style="font-size:11.0pt;font-family:"Calibri",sans-serif"> Leighton Pritchard [mailto:Leighton.Pritchard@hutton.ac.uk]
<br>
<b>Sent:</b> 25 June 2018 09:58<br>
<b>To:</b> Adam Witney <awitney@sgul.ac.uk><br>
<b>Cc:</b> biopython@mailman.open-bio.org<br>
<b>Subject:</b> Re: [Biopython] two tracks on same level when using GenomeDiagram<o:p></o:p></span></p>
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Hi Adam,<br>
<br>
I don’t think there’s a way to do it from the API - sorry about that.<br>
<br>
As a hacky way to produce a similar diagram, I’d consider generating a single track from the two annotated sequences you want to align, with a spacer of appropriate size, and rendering the diagram. Then I’d mask off the spacer using Illustrator or similar package.
It’s not exactly satisfactory, I know.<br>
<br>
Apologies,<br>
<br>
L.<br>
<br>
> On 24 Jun 2018, at 23:39, Adam Witney <<a href="mailto:awitney@sgul.ac.uk">awitney@sgul.ac.uk</a>> wrote:<br>
> <br>
> Hi,<br>
> <br>
> When using GenomeDiagram, is it possible to have two tracks on the same level? One left justified and the other right justified? For example, I want to draw something similar to this Fig 3<br>
> <br>
> <a href="https://www.researchgate.net/figure/Comparisons-of-integrated-and-conjugative-elements-from-L-hokkaidonensis-and-several_fig3_275052056" target="_blank">
https://www.researchgate.net/figure/Comparisons-of-integrated-and-conjugative-elements-from-L-hokkaidonensis-and-several_fig3_275052056</a><br>
> <br>
> the third gene track from the bottom, it looks like two tracks on the same line?<br>
> <br>
> Thanks for any help<br>
> <br>
> adam<br>
> <br>
> <br>
> <br>
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