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<span style="font-variant-ligatures: no-common-ligatures;">Installed biopython 1.7 running under anaconda installed python 2.7.14</span></p>
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<span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(255, 254, 254);">The first two failures involve a URL conflict where one has http, and the other has https.</span></p>
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<span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(255, 254, 254);"><br>
</span></p>
<p style="margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco;">
<span style="font-variant-ligatures: no-common-ligatures; background-color: rgb(254, 253, 253);">The last four come from arrays, and the only difference I see is the “expected” have two spaces between each number, and the “actual” have only one space.</span></p>
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<span style="font-variant-ligatures: no-common-ligatures">$ cd ../../biopython-1.70/Tests/</span></p>
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<span style="font-variant-ligatures: no-common-ligatures">$ python run_tests.py</span></p>
<p style="margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; color: rgb(9, 50, 186); background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Python version: 2.7.14 |Anaconda, Inc.| (default, Dec 7 2017, 17:05:42) </span></p>
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<span style="font-variant-ligatures: no-common-ligatures">[GCC 7.2.0]</span></p>
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<span style="font-variant-ligatures: no-common-ligatures;"></span></p>
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<span style="font-variant-ligatures: no-common-ligatures">Operating system: posix linux2</span></p>
<div><span style="font-variant-ligatures: no-common-ligatures">…</span></div>
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<span style="font-variant-ligatures: no-common-ligatures">Bio.SVDSuperimposer docstring test ...
<b>FAIL</b></span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">======================================================================</span></p>
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<span style="font-variant-ligatures: no-common-ligatures">FAIL: test_prodoc_html (test_ExPASy.ExPASyOnlineTests)</span></p>
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<span style="font-variant-ligatures: no-common-ligatures">----------------------------------------------------------------------</span></p>
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<span style="font-variant-ligatures: no-common-ligatures">Traceback (most recent call last):</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> File "/home/tu04809/build/biopython-1.70/Tests/test_ExPASy.py", line 51, in test_prodoc_html</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> 'http://prosite.expasy.org/cgi-bin/prosite/get-prodoc-entry?PDOC00001')</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">AssertionError: '<b>https</b>://prosite.expasy.org/cgi-bin/prosite/get-prodoc-entry?PDOC00001' != '<b>http</b>://prosite.expasy.org/cgi-bin/prosite/get-prodoc-entry?PDOC00001'</span></p>
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<span style="font-variant-ligatures: no-common-ligatures"></span><br>
</p>
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<span style="font-variant-ligatures: no-common-ligatures">======================================================================</span></p>
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<span style="font-variant-ligatures: no-common-ligatures">FAIL: test_prosite_html (test_ExPASy.ExPASyOnlineTests)</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">----------------------------------------------------------------------</span></p>
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<span style="font-variant-ligatures: no-common-ligatures">Traceback (most recent call last):</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> File "/home/tu04809/build/biopython-1.70/Tests/test_ExPASy.py", line 43, in test_prosite_html</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> 'http://prosite.expasy.org/cgi-bin/prosite/get-prosite-entry?PS00001')</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">AssertionError: '<b>https</b>://prosite.expasy.org/cgi-bin/prosite/get-prosite-entry?PS00001' != '<b>http</b>://prosite.expasy.org/cgi-bin/prosite/get-prosite-entry?PS00001'</span></p>
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<span style="font-variant-ligatures: no-common-ligatures"></span><br>
</p>
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<span style="font-variant-ligatures: no-common-ligatures">======================================================================</span></p>
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<span style="font-variant-ligatures: no-common-ligatures">FAIL: Record (Bio.Affy.CelFile)</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Doctest: Bio.Affy.CelFile.Record</span></p>
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<span style="font-variant-ligatures: no-common-ligatures">----------------------------------------------------------------------</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Traceback (most recent call last):</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> File "/home/tu04809/anaconda2/lib/python2.7/doctest.py", line 2226, in runTest</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> raise self.failureException(self.format_failure(new.getvalue()))</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">AssertionError: Failed doctest test for Bio.Affy.CelFile.Record</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> File "/home/tu04809/build/biopython-1.70/build/lib.linux-x86_64-2.7/Bio/Affy/CelFile.py", line 35, in Record</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255); min-height: 14px;">
<span style="font-variant-ligatures: no-common-ligatures"></span><br>
</p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">----------------------------------------------------------------------</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">File "/home/tu04809/build/biopython-1.70/build/lib.linux-x86_64-2.7/Bio/Affy/CelFile.py", line 46, in Bio.Affy.CelFile.Record</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Failed example:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> print(c.intensities)</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Expected:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [[ 234. 170. 22177. 164. 22104.]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 188. 188. 21871. 168. 21883.]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 188. 193. 21455. 198. 21300.]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 188. 182. 21438. 188. 20945.]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 193. 20370. 174. 20605. 168.]]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Got:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [[ 234. 170. 22177. 164. 22104.]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 188. 188. 21871. 168. 21883.]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 188. 193. 21455. 198. 21300.]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 188. 182. 21438. 188. 20945.]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 193. 20370. 174. 20605. 168.]]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">----------------------------------------------------------------------</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">File "/home/tu04809/build/biopython-1.70/build/lib.linux-x86_64-2.7/Bio/Affy/CelFile.py", line 52, in Bio.Affy.CelFile.Record</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Failed example:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> print(c.stdevs)</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Expected:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [[ 24. 34.5 2669. 19.7 3661.2]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 29.8 29.8 2795.9 67.9 2792.4]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 29.8 88.7 2976.5 62. 2914.5]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 29.8 76.2 2759.5 49.2 2762. ]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 38.8 2611.8 26.6 2810.7 24.1]]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Got:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [[ 24. 34.5 2669. 19.7 3661.2]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 29.8 29.8 2795.9 67.9 2792.4]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 29.8 88.7 2976.5 62. 2914.5]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 29.8 76.2 2759.5 49.2 2762. ]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 38.8 2611.8 26.6 2810.7 24.1]]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255); min-height: 14px;">
<span style="font-variant-ligatures: no-common-ligatures"></span><br>
</p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255); min-height: 14px;">
<span style="font-variant-ligatures: no-common-ligatures"></span><br>
</p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">======================================================================</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">FAIL: SVDSuperimposer (Bio.SVDSuperimposer)</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Doctest: Bio.SVDSuperimposer.SVDSuperimposer</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">----------------------------------------------------------------------</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Traceback (most recent call last):</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> File "/home/tu04809/anaconda2/lib/python2.7/doctest.py", line 2226, in runTest</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> raise self.failureException(self.format_failure(new.getvalue()))</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">AssertionError: Failed doctest test for Bio.SVDSuperimposer.SVDSuperimposer</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> File "/home/tu04809/build/biopython-1.70/build/lib.linux-x86_64-2.7/Bio/SVDSuperimposer/__init__.py", line 24, in SVDSuperimposer</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255); min-height: 14px;">
<span style="font-variant-ligatures: no-common-ligatures"></span><br>
</p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">----------------------------------------------------------------------</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">File "/home/tu04809/build/biopython-1.70/build/lib.linux-x86_64-2.7/Bio/SVDSuperimposer/__init__.py", line 83, in Bio.SVDSuperimposer.SVDSuperimposer</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Failed example:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> print(y_on_x1)</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Expected:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [[ 5.17e+01 -1.90e+00 5.01e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.04e+01 -1.23e+00 5.06e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.07e+01 -4.16e-02 5.15e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.02e+01 -1.94e-02 5.29e+01]]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Got:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [[ 5.17e+01 -1.90e+00 5.01e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.04e+01 -1.23e+00 5.06e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.07e+01 -4.16e-02 5.15e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.02e+01 -1.94e-02 5.29e+01]]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">----------------------------------------------------------------------</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">File "/home/tu04809/build/biopython-1.70/build/lib.linux-x86_64-2.7/Bio/SVDSuperimposer/__init__.py", line 88, in Bio.SVDSuperimposer.SVDSuperimposer</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Failed example:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> print(y_on_x2)</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Expected:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [[ 5.17e+01 -1.90e+00 5.01e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.04e+01 -1.23e+00 5.06e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.07e+01 -4.16e-02 5.15e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.02e+01 -1.94e-02 5.29e+01]]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Got:</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [[ 5.17e+01 -1.90e+00 5.01e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.04e+01 -1.23e+00 5.06e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.07e+01 -4.16e-02 5.15e+01]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures"> [ 5.02e+01 -1.94e-02 5.29e+01]]</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255); min-height: 14px;">
<span style="font-variant-ligatures: no-common-ligatures"></span><br>
</p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255); min-height: 14px;">
<span style="font-variant-ligatures: no-common-ligatures"></span><br>
</p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">----------------------------------------------------------------------</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">Ran 274 tests in 520.026 seconds</span></p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255); min-height: 14px;">
<span style="font-variant-ligatures: no-common-ligatures"></span><br>
</p>
<p style="color: rgb(9, 50, 186); margin: 0px; font-size: 10px; line-height: normal; font-family: Monaco; background-color: rgb(255, 255, 255);">
<span style="font-variant-ligatures: no-common-ligatures">FAILED (failures = 3)</span></p>
</div>
<div style="color: rgb(0, 0, 0);"><span style="font-variant-ligatures: no-common-ligatures"><br>
</span></div>
<div style="color: rgb(0, 0, 0);">
<div>
<div>-- </div>
<div>
<div style="font-size: medium; font-family: Consolas;">Gregory Dougherty</div>
<div style="font-size: medium; font-family: Consolas;">Sr. Analyst/Programmer | Information Technology</div>
<div style="font-size: medium; font-family: Consolas;">Information Technology</div>
<div style="font-size: medium; font-family: Consolas;">(507) 284-8493 | <a href="mailto:dougherty.gregory@mayo.edu">dougherty.gregory@mayo.edu</a></div>
</div>
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