<html>
<head>
<style><!--
.hmmessage P
{
margin:0px;
padding:0px
}
body.hmmessage
{
font-size: 12pt;
font-family:Calibri
}
--></style></head>
<body class='hmmessage'><div dir='ltr'><span><span><pre><code>from Bio import Entrez, SeqIO
from Bio.Blast import NCBIXML
from Bio.Blast import NCBIWWW
result_handle = NCBIWWW.qblast("blastn","nr", "CACTTATTTAGTTAGCTTGCAACCCTGGATTTTTGTTTACTGGAGAGGCC",entrez_query='"Beutenbergia cavernae DSM 12333" [Organism]')
blast_records = NCBIXML.parse(result_handle)
for blast_record in blast_records:
for alignment in blast_record.alignments:
for hsp in alignment.hsps:
print(hsp.query[0:75] + '...')
print(hsp.match[0:75] + '...')
print(hsp.sbjct[0:75] + '...')<br><br><br><br></code><span><span>this does not give me an output, although the sequence is actually a
sequence of the genome, so i must get a result. where is the error? the
query is correct?</span></span></pre></span></span> </div></body>
</html>