[BioPython] PubMed find_related

Michiel de Hoon mjldehoon at yahoo.com
Tue Nov 25 04:05:01 UTC 2008


>>> from Bio import Entrez
>>> handle = Entrez.elink(dbfrom='pubmed',id=12345)
>>> record = Entrez.read(handle)

Feel free to write a section about Entrez.elink for the Biopython documentation :-). Currently, this section is almost empty.

--Michiel.

--- On Mon, 11/24/08, Christian Jauvin <cjauvin at gmail.com> wrote:

> From: Christian Jauvin <cjauvin at gmail.com>
> Subject: [BioPython] PubMed find_related
> To: biopython at biopython.org
> Date: Monday, November 24, 2008, 5:18 PM
> Hi,
> 
> I'd like to use the PubMed find_related function, but
> the doc says
> that it's deprecated and that I should use the one in
> the Bio.Entrez
> module:
> 
> "Find related articles in PubMed, returns an ID list
> (DEPRECATED).
> Please use Bio.Entrez instead as described in the Biopython
> Tutorial."
> 
> The problem is that I can't find the equivalent in the
> Bio.Entrez
> module.. (I'm using latest version 1.49)
> 
> Thanks,
> 
> Christian
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> BioPython mailing list  -  BioPython at lists.open-bio.org
> http://lists.open-bio.org/mailman/listinfo/biopython


      



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