[BioPython] blastn parameters

Sebastian Bassi sbassi at gmail.com
Wed Apr 23 20:40:58 UTC 2008


On Wed, Apr 23, 2008 at 9:49 AM, Stefanie Lück <lueck at ipk-gatersleben.de> wrote:
> Hello!
>  Does anyone knows whether the parameters of NCBI's online blastn (http://www.ncbi.nlm.nih.gov/blast/Blast.cgi?PAGE=Nucleotides&PROGRAM=blastn&MEGABLAST=on&BLAST_PROGRAMS=megaBlast&PAGE_TYPE=BlastSearch&SHOW_DEFAULTS=on)
>  are the same, when I use blastall for a local blastn (without to change anything)?
>
>  On the homepage I couldn't find the parameters.

Just run the BLAST and the see the parameters at the end of the result page.
But, now I see there is a place to see parameters, at the end of the
page, look at this screenshot:
http://bayimg.com/FaJnAAABH


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