[BioPython] 454 sample file

Chris Lasher chris.lasher at gmail.com
Thu May 31 04:23:39 UTC 2007


454 sent a FASTA format file that contained sequence data when I
worked on a project last year. I don't suspect they provide the raw
flowgrams; at least they didn't in our experiences with them. You can
use Biopython's SeqIO to work with the FASTA file.

Best,
Chris

On 5/30/07, Sebastian Bassi <sbassi at gmail.com> wrote:
> Hello,
>
> Does anyboy have a 454 sequence output sample file? It is XML so
> should be easy to write a parser. I don't have access to such machine
> (we are stuck with ABI 31xx series) so I would be glad to receive one
> file (you can scramble the sequence if it is private).
> Best,
> SB.
>
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