<div dir="ltr">Great - I'll delay the PyPI upload and announcement until<div>at least one person confirms the zip/tar-ball works for an</div><div>install from source.</div><div><br></div><div>Thanks,<br><div><br></div><div>Peter</div></div></div><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Jul 11, 2017 at 9:06 AM, Mateusz Korycinski <span dir="ltr"><<a href="mailto:mkorycinski@protonmail.ch" target="_blank">mkorycinski@protonmail.ch</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div>Hi,<br></div><div><br></div><div>I can also test that on both Mac and Linux.</div><div><br></div><div class="m_-8982021536014373528protonmail_signature_block"><div class="m_-8982021536014373528protonmail_signature_block-user"><div>Best regards,<br></div><div>Mateusz Korycinski<br></div></div><div><br></div><div class="m_-8982021536014373528protonmail_signature_block-proton">Sent with <a href="https://protonmail.com" target="_blank">ProtonMail</a> Secure Email.<br></div></div><div><br></div><blockquote class="m_-8982021536014373528protonmail_quote" type="cite"><span class=""><div>-------- Original Message --------<br></div><div>Subject: Re: [Biopython-dev] Biopython 1.70 release<br></div></span><div><div class="h5"><div>Local Time: July 10, 2017 6:56 PM<br></div><div>UTC Time: July 10, 2017 4:56 PM<br></div><div>From: <a href="mailto:p.j.a.cock@googlemail.com" target="_blank">p.j.a.cock@googlemail.com</a><br></div><div>To: Sourav Singh <<a href="mailto:ssouravsingh12@gmail.com" target="_blank">ssouravsingh12@gmail.com</a>><br></div><div>Biopython-Dev Mailing List <<a href="mailto:biopython-dev@mailman.open-bio.org" target="_blank">biopython-dev@mailman.open-<wbr>bio.org</a>><br></div><div><br></div><div dir="ltr"><div>Thanks for the offer Sourav, but Ben Fulton is happy to do<br></div><div>the Windows installers again for Biopython 1.70.<br></div><div><br></div><div>It would however be great if you could download the zip file<br></div><div>(or tar-ball), and attempt to installing it from source and run<br></div><div>the tests (on Windows, Linux or Mac).<br></div><div><br></div><div>e.g.<br></div><div><br></div><div>wget <a href="http://biopython.org/DIST/biopython-1.70.zip" rel="noreferrer nofollow noopener" target="_blank">http://biopython.org/<wbr>DIST/biopython-1.70.zip</a><br></div><div>unzip biopython-1.70.zip<br></div><div>cd biopython-1.70<br></div><div>pip install .<br></div><div>cd Tests<br></div><div>python run_tests.py<br></div><div><br></div><div>Thanks,<br></div><div><br></div><div>Peter<br></div></div><div class="gmail_extra"><div><br></div><div class="gmail_quote"><div>On Mon, Jul 10, 2017 at 5:47 PM, Sourav Singh <span dir="ltr"><<a href="mailto:ssouravsingh12@gmail.com" rel="noreferrer nofollow noopener" target="_blank">ssouravsingh12@gmail.com</a>></span> wrote:<br></div><blockquote style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex" class="gmail_quote"><div dir="auto"><div>Hello,<br></div><div dir="auto"><br></div><div dir="auto">I can help with the testing of the gzipped code and creation of Windows installers for Biopython 1.70.<br></div><div dir="auto"><br></div><div dir="auto">Regards,<br></div><div dir="auto"><br></div><div dir="auto">Sourav<br></div></div><div class="gmail_extra"><div><br></div><div class="gmail_quote"><div><div class="m_-8982021536014373528h5">On Jul 10, 2017 9:59 PM, "Peter Cock" <<a href="mailto:p.j.a.cock@googlemail.com" rel="noreferrer nofollow noopener" target="_blank">p.j.a.cock@googlemail.com</a>> wrote:<br></div></div><blockquote style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex" class="gmail_quote"><div><div class="m_-8982021536014373528h5"><div>Hi Ben,<br></div><div> <br></div><div> While in the not too distant future I am hoping to adopt the<br></div><div> NumPy approach to building wheels (and installers?) [1],<br></div><div> it would be much appreciated if you could make all the<br></div><div> Windows installers for Biopython 1.70.<br></div><div> <br></div><div> (In particular Python 3.6, but if possible also Python 2.7,<br></div><div> 3.4 and 3.5 - we no longer support Python 3.3)<br></div><div> <br></div><div> Now that we have Windows-based continuous integration<br></div><div> up and running on AppVeyor [2], I didn't feel it necessary<br></div><div> to bother you in advance about running the unit tests.<br></div><div> <br></div><div> Much obliged,<br></div><div> <br></div><div> Peter<br></div><div> <br></div><div> [1] <a rel="noreferrer nofollow noopener" href="http://mailman.open-bio.org/pipermail/biopython-dev/2017-July/021817.html" target="_blank">http://mailman.open-bio.org/pi<wbr>permail/biopython-dev/2017-Jul<wbr>y/021817.html</a><br></div><div> <br></div><div> [2] <a rel="noreferrer nofollow noopener" href="http://mailman.open-bio.org/pipermail/biopython-dev/2017-June/021797.html" target="_blank">http://mailman.open-bio.org/pi<wbr>permail/biopython-dev/2017-Jun<wbr>e/021797.html</a><br></div><div> <a rel="noreferrer nofollow noopener" href="https://ci.appveyor.com/project/biopython/biopython/history" target="_blank">https://ci.appveyor.com/projec<wbr>t/biopython/biopython/history</a><br></div><div> <br></div><div> <br></div><div> On Mon, Jul 10, 2017 at 4:43 PM, Peter Cock <<a href="mailto:p.j.a.cock@googlemail.com" rel="noreferrer nofollow noopener" target="_blank">p.j.a.cock@googlemail.com</a>> wrote:<br></div><div> > Hello all,<br></div><div> ><br></div><div> > I'd like to delay the PyPI upload and official release announcement until<br></div><div> > someone else has confirmed they could install this - any volunteers?<br></div><div> ><br></div><div> > <a rel="noreferrer nofollow noopener" href="http://biopython.org/DIST/biopython-1.70.tar.gz" target="_blank">http://biopython.org/DIST/biop<wbr>ython-1.70.tar.gz</a><br></div><div> > <a rel="noreferrer nofollow noopener" href="http://biopython.org/DIST/biopython-1.70.zip" target="_blank">http://biopython.org/DIST/biop<wbr>ython-1.70.zip</a><br></div><div> > Checksums:<br></div><div> ><br></div><div> > $ md5sum biopython-1.70.*<br></div><div> > feff7a3e2777e43f9b13039b344e06<wbr>ff  biopython-1.70.tar.gz<br></div><div> > 6307ab27c257fe69b9dae4bfc3052f<wbr>49  biopython-1.70.zip<br></div><div> ><br></div><div> > $ sha256sum biopython-1.70.*<br></div><div> > 4a7c5298f03d1a45523f32bae1fffc<wbr>ff323ea9dce007fb1241af092f5ab2<wbr>e45b<br></div><div> > biopython-1.70.tar.gz<br></div><div> > 34312ce899f6c3fc9dea77ca997f9a<wbr>8c228043d05284a0653577594aeb11<wbr>9d4f<br></div><div> > biopython-1.70.zip<br></div><div> ><br></div><div> > These are from this tagged commit on the main repository:<br></div><div> ><br></div><div> > <a rel="noreferrer nofollow noopener" href="https://github.com/biopython/biopython/tree/biopython-170" target="_blank">https://github.com/biopython/b<wbr>iopython/tree/biopython-170</a><br></div><div> > <a rel="noreferrer nofollow noopener" href="https://github.com/biopython/biopython/commit/4d01a84f0aa8f91863075f7f0f074b4b69e53959" target="_blank">https://github.com/biopython/b<wbr>iopython/commit/4d01a84f0aa8f9<wbr>1863075f7f0f074b4b69e53959</a><br></div><div> ><br></div><div> > The revised documentation is already live:<br></div><div> ><br></div><div> > <a rel="noreferrer nofollow noopener" href="http://biopython.org/DIST/docs/api/" target="_blank">http://biopython.org/DIST/docs<wbr>/api/</a><br></div><div> > <a rel="noreferrer nofollow noopener" href="http://biopython.org/DIST/docs/tutorial/Tutorial.pdf" target="_blank">http://biopython.org/DIST/docs<wbr>/tutorial/Tutorial.pdf</a><br></div><div> > <a rel="noreferrer nofollow noopener" href="http://biopython.org/DIST/docs/tutorial/Tutorial.html" target="_blank">http://biopython.org/DIST/docs<wbr>/tutorial/Tutorial.html</a><br></div><div> > etc<br></div><div> ><br></div><div> > Peter<br></div><div> ><br></div><div> > On Mon, Jul 10, 2017 at 2:19 PM, Peter Cock <<a href="mailto:p.j.a.cock@googlemail.com" rel="noreferrer nofollow noopener" target="_blank">p.j.a.cock@googlemail.com</a>> wrote:<br></div><div> >> Thanks everyone who helped recently with resolving<br></div><div> >> open issues and pull requests - especially Eric who<br></div><div> >> did lots last week.<br></div><div> >><br></div><div> >> I'm going to try the release this afternoon, so please<br></div><div> >> consider the mast branch frozen for the time being.<br></div><div> >><br></div><div> >> Thanks,<br></div><div> >><br></div><div> >> Peter<br></div></div></div><div><span>______________________________<wbr>_________________<br> Biopython-dev mailing list<br> <a href="mailto:Biopython-dev@mailman.open-bio.org" rel="noreferrer nofollow noopener" target="_blank">Biopython-dev@mailman.open-bio<wbr>.org</a><br> <a rel="noreferrer nofollow noopener" href="http://mailman.open-bio.org/mailman/listinfo/biopython-dev" target="_blank">http://mailman.open-bio.org/ma<wbr>ilman/listinfo/biopython-dev</a></span></div></blockquote></div></div></blockquote></div></div></div></div></blockquote></blockquote></div><br></div>