<html><head></head><body><div style="color:#000; background-color:#fff; font-family:HelveticaNeue-Light, Helvetica Neue Light, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:10px"><div id="yui_3_16_0_ym19_1_1471848584028_17988">As a related point, the NCBI website lists Biopython 1.67 as the https-compliant version, while this should be 1.68 if I understand correctly.</div><div id="yui_3_16_0_ym19_1_1471848584028_18142">See the table on this page:</div><div dir="ltr" id="yui_3_16_0_ym19_1_1471848584028_18023"><a class="" id="yui_3_16_0_ym19_1_1471848584028_18026" href="http://www.ncbi.nlm.nih.gov/home/develop/https-guidance.shtml">http://www.ncbi.nlm.nih.gov/home/develop/https-guidance.shtml</a></div><div id="yui_3_16_0_ym19_1_1471848584028_18141"><br></div><div id="yui_3_16_0_ym19_1_1471848584028_18119"><br></div><div id="yui_3_16_0_ym19_1_1471848584028_18078" dir="ltr"><br></div><div id="yui_3_16_0_ym19_1_1471848584028_18072" dir="ltr">Best,</div><div id="yui_3_16_0_ym19_1_1471848584028_18077" dir="ltr">-Michiel<br></div><div id="yui_3_16_0_ym19_1_1471848584028_17989"><span></span></div> <div class="qtdSeparateBR"><br><br></div><div style="display: block;" class="yahoo_quoted"> <div style="font-family: HelveticaNeue-Light, Helvetica Neue Light, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 10px;"> <div style="font-family: HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 16px;"> <div dir="ltr"><font face="Arial" size="2"> On Friday, August 12, 2016 4:37 PM, Peter Cock <p.j.a.cock@googlemail.com> wrote:<br></font></div> <br><br> <div class="y_msg_container">Thanks Ben,<br clear="none"><br clear="none">I used to use cygwin on Windows XP, and I would certainly<br clear="none">be giving Windows Ubuntu Bash a test if I had a Windows 10<br clear="none">machine - a very interesting development. I presume it can<br clear="none">run its own copy of a (Linux Ubuntu) Python too?<br clear="none"><br clear="none">Peter<br clear="none"><div class="yqt2410676535" id="yqtfd36425"><br clear="none">On Thu, Aug 11, 2016 at 8:09 PM, Fulton, Ben <<a shape="rect" ymailto="mailto:befulton@iu.edu" href="mailto:befulton@iu.edu">befulton@iu.edu</a>> wrote:<br clear="none">> Yes, I can do the installers (although I am moving away from strict Windows to Windows Ubuntu Bash).<br clear="none">><br clear="none">> --<br clear="none">> Ben Fulton<br clear="none">> Research Technologies<br clear="none">> Scientific Applications and Performance Tuning<br clear="none">> Indiana University<br clear="none">> E-Mail: <a shape="rect" ymailto="mailto:befulton@iu.edu" href="mailto:befulton@iu.edu">befulton@iu.edu</a><br clear="none">><br clear="none">> -----Original Message-----<br clear="none">> From: Biopython-dev [mailto:biopython-dev-bounces+befulton=<a shape="rect" ymailto="mailto:iu.edu@mailman.open-bio.org" href="mailto:iu.edu@mailman.open-bio.org">iu.edu@mailman.open-bio.org</a>] On Behalf Of Peter Cock<br clear="none">> Sent: Thursday, August 11, 2016 5:15 AM<br clear="none">> To: Biopython-Dev Mailing List <<a shape="rect" ymailto="mailto:biopython-dev@mailman.open-bio.org" href="mailto:biopython-dev@mailman.open-bio.org">biopython-dev@mailman.open-bio.org</a>>; Christian Brueffer <<a shape="rect" ymailto="mailto:christian@brueffer.de" href="mailto:christian@brueffer.de">christian@brueffer.de</a>>; Ben Fulton <<a shape="rect" ymailto="mailto:ben@benfulton.net" href="mailto:ben@benfulton.net">ben@benfulton.net</a>>; <a shape="rect" ymailto="mailto:bow@bow.web.id" href="mailto:bow@bow.web.id">bow@bow.web.id</a><br clear="none">> Subject: [Biopython-dev] Biopython 1.68 plans (mid August?)<br clear="none">><br clear="none">> Dear Biopythoneers,<br clear="none">><br clear="none">> The NCBI plan to switch to HTTPS on 1 September 2016, so it<br clear="none">> would be good to get a new Biopython release out before that<br clear="none">> with the changes to use HTTPS by default (which we know<br clear="none">> works).<br clear="none">><br clear="none">> To that end, I would like us to do the Biopython 1.68 release<br clear="none">> this month (August), perhaps aiming for next week?<br clear="none">><br clear="none">> Christian - we talked briefly about this at BOSC 2016 - but<br clear="none">> would you be willing to try to work though the currently release<br clear="none">> instructions (as far as possible without pushing any changes<br clear="none">> to GitHub or PyPI) to help pin point what I have left unclear<br clear="none">> with the recent website changes?<br clear="none">><br clear="none">> <a shape="rect" href="http://biopython.org/wiki/Building_a_release" target="_blank">http://biopython.org/wiki/Building_a_release</a><br clear="none">><br clear="none">> Ben - would you be able to build the Windows installers<br clear="none">> again please?<br clear="none">><br clear="none">> Bow - are you ready to remove the experimental warning<br clear="none">> from Bio.SearchIO? Or at least, most of it - I know you have<br clear="none">> some changes in mind for the Exonerate parser:<br clear="none">> <a shape="rect" href="https://github.com/biopython/biopython/pull/815" target="_blank">https://github.com/biopython/biopython/pull/815</a><br clear="none">><br clear="none">> Everyone - is there anything urgent we need to review and<br clear="none">> merge? What am I overlooking? There are lots of pull<br clear="none">> requests we could merge, and some are close to ready.<br clear="none">><br clear="none">> Thanks,<br clear="none">><br clear="none">> Peter<br clear="none">> _______________________________________________<br clear="none">> Biopython-dev mailing list<br clear="none">> <a shape="rect" ymailto="mailto:Biopython-dev@mailman.open-bio.org" href="mailto:Biopython-dev@mailman.open-bio.org">Biopython-dev@mailman.open-bio.org</a><br clear="none">> <a shape="rect" href="http://mailman.open-bio.org/mailman/listinfo/biopython-dev" target="_blank">http://mailman.open-bio.org/mailman/listinfo/biopython-dev</a><br clear="none">_______________________________________________<br clear="none">Biopython-dev mailing list<br clear="none"><a shape="rect" ymailto="mailto:Biopython-dev@mailman.open-bio.org" href="mailto:Biopython-dev@mailman.open-bio.org">Biopython-dev@mailman.open-bio.org</a><br clear="none"><a shape="rect" href="http://mailman.open-bio.org/mailman/listinfo/biopython-dev" target="_blank">http://mailman.open-bio.org/mailman/listinfo/biopython-dev</a><br clear="none"></div><br><br></div> </div> </div> </div></div></body></html>