<html><head></head><body><div style="color:#000; background-color:#fff; font-family:HelveticaNeue-Light, Helvetica Neue Light, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif;font-size:10px"><div id="yui_3_16_0_1_1445611344341_6389" dir="ltr">I tried running pip, and I got "pip: command not found". <br></div><div id="yui_3_16_0_1_1445611344341_6445" dir="ltr">-Michiel<br></div><div id="yui_3_16_0_1_1445611344341_6355"><span></span></div> <br><div class="qtdSeparateBR"><br><br></div><div style="display: block;" class="yahoo_quoted"> <div style="font-family: HelveticaNeue-Light, Helvetica Neue Light, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 10px;"> <div style="font-family: HelveticaNeue, Helvetica Neue, Helvetica, Arial, Lucida Grande, sans-serif; font-size: 16px;"> <div dir="ltr"> <font face="Arial" size="2"> On Friday, October 23, 2015 11:36 PM, Peter Cock <p.j.a.cock@googlemail.com> wrote:<br> </font> </div> <br><br> <div class="y_msg_container">That sounds good - do you fancy having a go at updating<br clear="none">the README and Installation.txt file & making a pull request?<br clear="none"><br clear="none"><a shape="rect" href="https://github.com/biopython/biopython/blob/master/README" target="_blank">https://github.com/biopython/biopython/blob/master/README</a><br clear="none"><a shape="rect" href="https://github.com/biopython/biopython/blob/master/Doc/install/Installation.tex" target="_blank">https://github.com/biopython/biopython/blob/master/Doc/install/Installation.tex</a><br clear="none"><br clear="none">The longer installation document still talks about easy_install<br clear="none">which (I believe) have been superseded by pip now.<br clear="none"><br clear="none">Peter<br clear="none"><div class="yqt1047279838" id="yqtfd91151"><br clear="none">On Fri, Oct 23, 2015 at 3:23 PM, Chris Mitchell <<a shape="rect" ymailto="mailto:chris.mit7@gmail.com" href="mailto:chris.mit7@gmail.com">chris.mit7@gmail.com</a>> wrote:<br clear="none">> I would add in a note that if they do not have super-user privileges, they<br clear="none">> may use pip install --user biopython to install it locally for that user.<br clear="none">><br clear="none">> On Fri, Oct 23, 2015 at 9:55 AM, Peter Cock <<a shape="rect" ymailto="mailto:p.j.a.cock@googlemail.com" href="mailto:p.j.a.cock@googlemail.com">p.j.a.cock@googlemail.com</a>><br clear="none">> wrote:<br clear="none">>><br clear="none">>> Hi all,<br clear="none">>><br clear="none">>> Should we be suggesting "pip install biopython" as the<br clear="none">>> first approach under "For the impatient" in the README,<br clear="none">>> over download the source then:<br clear="none">>><br clear="none">>> $ python setup.py build<br clear="none">>> $ python setup.py test<br clear="none">>> $ sudo python setup.py install<br clear="none">>><br clear="none">>> I did add pip to the wiki, but perhaps that was premature?<br clear="none">>><br clear="none">>> <a shape="rect" href="http://biopython.org/wiki/Download" target="_blank">http://biopython.org/wiki/Download</a><br clear="none">>><br clear="none">>> Also, can we get rid of the easy_install section on the wiki<br clear="none">>> in favour of pip?<br clear="none">>><br clear="none">>> Peter<br clear="none">>> _______________________________________________<br clear="none">>> Biopython-dev mailing list<br clear="none">>> <a shape="rect" ymailto="mailto:Biopython-dev@mailman.open-bio.org" href="mailto:Biopython-dev@mailman.open-bio.org">Biopython-dev@mailman.open-bio.org</a><br clear="none">>> <a shape="rect" href="http://mailman.open-bio.org/mailman/listinfo/biopython-dev" target="_blank">http://mailman.open-bio.org/mailman/listinfo/biopython-dev</a><br clear="none">><br clear="none">><br clear="none">_______________________________________________<br clear="none">Biopython-dev mailing list<br clear="none"><a shape="rect" ymailto="mailto:Biopython-dev@mailman.open-bio.org" href="mailto:Biopython-dev@mailman.open-bio.org">Biopython-dev@mailman.open-bio.org</a><br clear="none"><a shape="rect" href="http://mailman.open-bio.org/mailman/listinfo/biopython-dev" target="_blank">http://mailman.open-bio.org/mailman/listinfo/biopython-dev</a><br clear="none"></div><br><br></div> </div> </div> </div></div></body></html>