[Bioperl-pipeline] problem downloading biosql.

Luc Smink Luc.Smink@cimr.cam.ac.uk
Thu, 3 Oct 2002 14:44:09 +0100 (BST)


I am sorted now, it just worked.

Cheers Luc

On Thu, 3 Oct 2002, Jason Stajich wrote:

> so you still can't get it?
>
> [jason@sonogno jason]$ cvs -d :pserver:cvs@cvs.open-bio.org:/home/repository/biosql login
> Logging in to :pserver:cvs@cvs.open-bio.org:2401/home/repository/biosql
> CVS password:
> (typed cvs here)
> [jason@sonogno jason]$ cvs -d :pserver:cvs@cvs.open-bio.org:/home/repository/biosql co biosql-schema
> cvs server: Updating biosql-schema
> U biosql-schema/README
> cvs server: Updating biosql-schema/doc
> U biosql-schema/doc/README
> ...
>
>
> On Thu, 3 Oct 2002, Luc Smink wrote:
>
> > Hi Jason,
> >
> > I did login with the password, I downloaded all the other pipeline stuff
> > fine. I stuck exactely to the instructions.
> >
> > Cheers Luc
> >
> >
> > On Thu, 3 Oct 2002, Jason Stajich wrote:
> >
> > > Note: servers were down for maintence and then an apparent network
> > > partition occurred in NY-area which may keep them off-line for a few more
> > > hours (but if this mail makes it through the list, things may be okay).
> > >
> > > You forgot to login with a password as the msg reports:
> > >
> > > % cvs -d :pserver:cvs@cvs.open-bio.org:/home/repository/biosql login
> > > password: (type cvs here)
> > >
> > > % cvs -d :pserver:cvs@cvs.open-bio.org:/home/repository/biosql co
> > > biosql-schema
> > >
> > >
> > > The webpage http://cvs.open-bio.org details all of this (when it is up
> > > and running)
> > >
> > > -jason
> > >
> > > On Thu, 3 Oct 2002, Luc Smink wrote:
> > >
> > > > Hi,
> > > >
> > > > I am trying to set up biopipe locally, I want to try and get it to work
> > > > with Sun Grid Engine. So I have started downlading from cvs but I am
> > > > running into trouble with biosql. below is the error, I have downloaded
> > > > all the other stuff fine.
> > > >
> > > > .../~ > cvs -d :pserver:cvs@cvs.open-bio.org:/home/repository/biosql
> > > > checkout biosql-schema
> > > > cvs checkout: authorization failed: server cvs.open-bio.org rejected
> > > > access to /home/repository/biosql for user cvs
> > > > cvs checkout: used empty password; try "cvs login" with a real password
> > > >
> > > > Any suggestion greatly appreciated.
> > > >
> > > > Cheers Luc
> > > >
> > > >   X------------------------------------------------------------------------
> > > >  /-) Dr Luc Smink 			  Email:luc.smink@cimr.cam.ac.uk
> > > > (-/  Head of Bioinformatics
> > > >  X   JDRF/WT Diabetes and Inflammation Laboratory
> > > > (-\  Cambridge Institute for Medical Research,  University of Cambridge,
> > > >  \-) Cambridge, UK. Phone: +44 (0)1223 763211, Fax: +44 (0)1223 762102
> > > >   X ------------------------------------------------------------------------
> > > >
> > > > _______________________________________________
> > > > bioperl-pipeline mailing list
> > > > bioperl-pipeline@bioperl.org
> > > > http://bioperl.org/mailman/listinfo/bioperl-pipeline
> > > >
> > >
> > >
> >
> >   X------------------------------------------------------------------------
> >  /-) Dr Luc Smink 			  Email:luc.smink@cimr.cam.ac.uk
> > (-/  Head of Bioinformatics
> >  X   JDRF/WT Diabetes and Inflammation Laboratory
> > (-\  Cambridge Institute for Medical Research,  University of Cambridge,
> >  \-) Cambridge, UK. Phone: +44 (0)1223 763211, Fax: +44 (0)1223 762102
> >   X ------------------------------------------------------------------------
> >
> > _______________________________________________
> > bioperl-pipeline mailing list
> > bioperl-pipeline@bioperl.org
> > http://bioperl.org/mailman/listinfo/bioperl-pipeline
> >
>
>

  X------------------------------------------------------------------------
 /-) Dr Luc Smink 			  Email:luc.smink@cimr.cam.ac.uk
(-/  Head of Bioinformatics
 X   JDRF/WT Diabetes and Inflammation Laboratory
(-\  Cambridge Institute for Medical Research,  University of Cambridge,
 \-) Cambridge, UK. Phone: +44 (0)1223 763211, Fax: +44 (0)1223 762102
  X ------------------------------------------------------------------------