[Bioperl-l] questions on analysising clustalw alignment result files

Peter Cock p.j.a.cock at googlemail.com
Tue Jul 5 14:51:28 UTC 2011

On Tue, Jul 5, 2011 at 3:45 PM, Chris Fields <cjfields at illinois.edu> wrote:
> The best thing to do in this case is to file a bug for tracking
> (might be a good thing to have cross-lang bugs in this case, maybe?).
> Anyway, it's very likely as Peter says, the parser is choking on something
> and doesn't recognize the file.
> chris

Good plan Chris.

Tao, please goto http://redmine.open-bio.org/projects/bioperl to file
a bug. As well as the example output file from your original email,
could you also include the input file for the alignment, and the
clustalw2 command line used to create it?



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