[Bioperl-l] question about positioning peptide in a full protein sequence

Dave Messina David.Messina at sbc.su.se
Sun Feb 20 21:18:50 UTC 2011


Hi Mingwei,

I'm not sure what you mean by "positioning" here. Do you want to get the
coordinates of the post-translational sites out of a protein sequence
database record? Or do you want to draw the post-translational sites on a
picture of the protein sequence? Or something else entirely?


Dave




On Sat, Feb 19, 2011 at 15:53, Mingwei Min <mm809 at cam.ac.uk> wrote:

> Hi,
>
> I am trying to positioning some post-tranlational modification sites,
> which is marked in peptides, in a full length protein sequence. Anyone
> would be kind to tell me the model I could use for this?
>
> Many thanks
>
> Mingwei
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