[Bioperl-l] Trimming low quality reads

Juan Jovel jovel_juan at hotmail.com
Wed Feb 16 17:01:21 UTC 2011


Hello Shalabh,
http://hannonlab.cshl.edu/fastx_toolkit/
is pretty good. Do not re-invent the wheel if not necessary. The Hannon's lab has done a lot of work on deep sequencing analyses which led to many fundamental discoveries.....this is a reason to trust their processing algorithms.
Best,
JUAN 		 	   		  



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