[Bioperl-l] Problem installing CJFIELDS/BioPerl-1.6.1.tar.gz

ANJAN PURKAYASTHA anjan.purkayastha at gmail.com
Thu Feb 3 22:20:40 UTC 2011


Hello,
I am unable to install distribution CJFIELDS/BioPerl-1.6.1.tar.gz  on my Mac
10.6.6.
Here is the tail end of the installation report:
Result: FAIL
Failed 9/329 test programs. 8/19347 subtests failed.
  CJFIELDS/BioPerl-1.6.1.tar.gz
  ./Build test -- NOT OK
//hint// to see the cpan-testers results for installing this module, try:
  reports CJFIELDS/BioPerl-1.6.1.tar.gz
Warning (usually harmless): 'YAML' not installed, will not store persistent
state
Running Build install
  make test had returned bad status, won't install without force
Could not read '/Users/anjan/.cpan/build/GraphViz-2.04-NQf6M6/META.yml'.
Falling back to other methods to determine prerequisites
Failed during this command:
 SHLOMIF/Error-0.17016.tar.gz                 : install NO
 JSWARTZ/Cache-Cache-1.06.tar.gz              : install NO
 LDS/AcePerl-1.92.tar.gz                      : install NO
 JMCNAMARA/OLE-Storage_Lite-0.19.tar.gz       : install NO
 JMCNAMARA/Spreadsheet-ParseExcel-0.58.tar.gz : install NO
 GROMMEL/Math-Random-0.71.tar.gz              : install NO
 JHI/Graph-0.94.tar.gz                        : install NO
 JARW/Math-Spline-0.01.tar.gz                 : install NO
 SHLOMIF/Statistics-Descriptive-3.0201.tar.gz : install NO
 RONAN/SVG-2.50.tar.gz                        : install NO
 JARW/Math-Derivative-0.01.tar.gz             : install NO
 COGENT/Tree-DAG_Node-1.06.tar.gz             : install NO
 ALLENDAY/SVG-Graph-0.02.tar.gz               : install NO
 ADAMK/Task-Weaken-1.03.tar.gz                : install NO
 ADAMK/Class-Inspector-1.25.tar.gz            : install NO
 MKUTTER/SOAP-Lite-0.712.tar.gz               : install NO
 CMUNGALL/Data-Stag-0.11.tar.gz               : install NO
 LBROCARD/GraphViz-2.04.tar.gz                : writemakefile NO
'/usr/bin/perl Makefile.PL' returned status 512
 TOKUHIROM/Test-Requires-0.06.tar.gz          : install NO
 DOY/Try-Tiny-0.09.tar.gz                     : install NO
 RJBS/Test-Fatal-0.003.tar.gz                 : install NO
 ADAMK/Params-Util-1.03.tar.gz                : install NO
 RJBS/Sub-Install-0.925.tar.gz                : install NO
 DROLSKY/Package-DeprecationManager-0.10.tar.gz: install NO
 FLORA/MRO-Compat-0.11.tar.gz                 : install NO
 DOY/Package-Stash-XS-0.21.tar.gz             : install NO
 DOY/Package-Stash-0.25.tar.gz                : make_test NO
 FLORA/Sub-Name-0.05.tar.gz                   : install NO
 RJBS/Data-OptList-0.106.tar.gz               : install NO
 CHOCOLATE/Scope-Guard-0.20.tar.gz            : install NO
 RJBS/Sub-Exporter-0.982.tar.gz               : install NO
 FLORA/Devel-GlobalDestruction-0.03.tar.gz    : install NO
 FLORA/Class-MOP-1.12.tar.gz                  : make_test NO
 DROLSKY/Moose-1.21.tar.gz                    : make_test NO
 DAVECROSS/Array-Compare-2.01.tar.gz          : make_test NO
 MHX/Convert-Binary-C-0.74.tar.gz             : install NO
 TPEDERSE/Algorithm-Munkres-0.08.tar.gz       : install NO
 MIROD/XML-Twig-3.37.tar.gz                   : install NO
 JHI/Set-Scalar-1.25.tar.gz                   : install NO
 DCONWAY/Parse-RecDescent-1.965001.tar.gz     : install NO
 JMCNAMARA/Spreadsheet-WriteExcel-2.37.tar.gz : install NO
 KMACLEOD/libxml-perl-0.08.tar.gz             : install NO
 RBERJON/XML-Filter-BufferText-1.01.tar.gz    : install NO
 PERIGRIN/XML-SAX-Writer-0.53.tar.gz          : install NO
 RDF/Clone-0.31.tar.gz                        : install NO
 MIROD/XML-XPathEngine-0.12.tar.gz            : install NO
 TJMATHER/XML-RegExp-0.03.tar.gz              : install NO
 TJMATHER/XML-DOM-1.44.tar.gz                 : install NO
 MIROD/XML-DOM-XPath-0.14.tar.gz              : install NO
 SHAWNPW/PostScript-0.06.tar.gz               : install NO
 CJFIELDS/BioPerl-1.6.1.tar.gz                : make_test NO

Any feedback on what may be going wrong will be immensley helpful.
Thanks,
Anjan

-- 
===================================
Anjan Purkayastha, PhD
Senior Computational Biologist
TessArae LLC
46090 Lake Center Plaza, Suite 304
Potomac Falls, VA 20165**
Mobile-703.740.6939
===================================



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